Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1531 |
Symbol | |
ID | 7411277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1484741 |
End bp | 1486534 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643718652 |
Product | hypothetical protein |
Protein accession | YP_002576086 |
Protein GI | 222824512 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TCTCTCTTTG TGCTATAGCA CTTAGTTCTT TAATCTATGC TAATGAAGGA GGCATTAGCA TAGCTAAAAA TGATATAGAA AAGGTTATAG AACTATCTCC TGATAGAAAC CTCCCTCAAA ACAAAGCTAT CAAAGAAAAT CTAAAAACTA AAGATGATTA TATAAAAACT CAAGAAGCTA AAAAAGACTT TGAAGCAAAA AAGAAAGCCT TAAAAGAAAA ACTACAAGAA AATAAAGCTA GTGAGGAAAC TAACAGTCAA ACCAATACTA ATTCTAACAA TAACACCACT ACCACTAAAA AGGTAATAAC CAAATACAAA TTCATCATCA CTAATGAAAA TACTAGCTTT AAAAAGATAG GTATCAAAGA AGAAGATTTA CAATTACTTA TTAGTGAGTT TAGCACTAAA AAATTTAGCT TACAAGATTT ACAAGATATA TCTAATATCA TAGCTTATTA TTTTCAGGTA AATGGTTATC CTGCTGCAAC AGCTTATGTG CCCCAACAAG AATTTGAAGA TAGTGTGCAA ATAAATATAG CCTTAGGAAC ATTAGGTAAG TATATAATAA AGAATAAAAC AACTATAAAA GATTATTTTG TAGAAAGTAA ACTTAATGAA AGAATTAAAG GTAAAATCAT CTCTACTAAA TTAATAGAAG ATAGTGTATA TAAAGTCAAT GAAATGTATG GTGTACAAAC CCTAGCAGGT TTACAAGCAG GAGAGAATGT AGGAGAAACT GATATAGTTA TAGAAGTAGA ACCTGATACT AAGGCTAATG TATTATTATA TGCTGATAAT TATGGTATTG AAAGTGCAGG GGATATTAGA GCTGGTATTA GCATGGGTTT TAACTCATTA TTTAACATGG GTGATTATTA TAATTTTTAC TTACAATCAA GCAATGAAAA TCAAATCAAC TATGGAGCTA GTTATACTTT CTTTTTAGGA AATTTAAAAA TTACTCCAAG CATATCTCAA GGAACATATT CTTTAGGTGG AGAATATAAA GAAGTTGGTT TTAGTGGTAC TTCTAGAAAT TTCGGTATAG ATTTTTCTTA CCCTGTGTGG ATAAACACTA ATTCATCTTT ATACTTTACT TCTAGTATTT ATCATAAGAT ATTAAAAGAT GGGCCTTTTT CAAATATATT TGAAAATTAT AGTATTGATA AACATTCTAA TGTAGGCAGT ATGGGTTTAG AAGGTTTATT TAGAGGATTT GAAAACAACA CCTTAAGTTA TAGTGCTAAG GTAAGTGTAG GTAAGGTTAA TGATGATGGT GTTACTATGT TTGGAAATAC ATTCAAAAGT GGAGGCAAAG GCTTTGGCTG GTTTAGAAAA CTCAATGCTA GTGTGAATAA TTATTATAGT ATTAATGAAT ACATCACTCA TACTTTAAAT ATAAACTATC AAAAGGTATT AGGGAATTTT GAATTAGATT CTTCTGAAAG CTCATCTTTA GGTGGAGCCT ATGGAGTAAG AGCGTATGAT AATGGTGAGG GTGATGGAGA TAATACCATA GTAGCTAACT TTGGTTTAAG AATAAACATA CCAAATACTA ATTTTTACTT TACTCCTTTT TATGATATAG GCTATGCATG GTATGAAAAA GATGGTGGTA GATTAACAGA TGAACATTTT TTAGACGCAG TAGGTTTACA AATACTTTAT AATAAACCAA ATGAATACTA TATTAAACTA GATGGAGCAA GAGCAGTTCA TCAGTATAAA TACGATGATG ATCACAGAAT GAAATTATAT TTAAGTGGTG GGATTTATTT TTAA
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Protein sequence | MKKLSLCAIA LSSLIYANEG GISIAKNDIE KVIELSPDRN LPQNKAIKEN LKTKDDYIKT QEAKKDFEAK KKALKEKLQE NKASEETNSQ TNTNSNNNTT TTKKVITKYK FIITNENTSF KKIGIKEEDL QLLISEFSTK KFSLQDLQDI SNIIAYYFQV NGYPAATAYV PQQEFEDSVQ INIALGTLGK YIIKNKTTIK DYFVESKLNE RIKGKIISTK LIEDSVYKVN EMYGVQTLAG LQAGENVGET DIVIEVEPDT KANVLLYADN YGIESAGDIR AGISMGFNSL FNMGDYYNFY LQSSNENQIN YGASYTFFLG NLKITPSISQ GTYSLGGEYK EVGFSGTSRN FGIDFSYPVW INTNSSLYFT SSIYHKILKD GPFSNIFENY SIDKHSNVGS MGLEGLFRGF ENNTLSYSAK VSVGKVNDDG VTMFGNTFKS GGKGFGWFRK LNASVNNYYS INEYITHTLN INYQKVLGNF ELDSSESSSL GGAYGVRAYD NGEGDGDNTI VANFGLRINI PNTNFYFTPF YDIGYAWYEK DGGRLTDEHF LDAVGLQILY NKPNEYYIKL DGARAVHQYK YDDDHRMKLY LSGGIYF
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