Gene Cla_1504 details

Gene Information

• Locus tag: Cla_1504
• ID: 7411250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1452900
• End bp: 1454774
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 643718626
• Product: conserved hypothetical integral membrane protein, mechanosensitive ion channel family
• Protein accession: YP_002576060
• Protein GI: 222824486
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0668] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTATTGTATT TTTATTATTT TTCCTTTTTG TAAATTTTTC AAATGCTAAT 
GAAGATAATG CTACAAATAT AGATAAAAAT AGTATTTTTG CTTTGGTTCA AAATTATGTG 
GAATTAAATT TTGTTTTAGA AAGTTATAGT GGTTCAGATT TAAATTCAAG TGAATATCAA 
GACAATATTA GAGAAATAGA AAAACAAAAA CAAGATATTT TGACAAAAAT TCCTTTAAGA 
ATGATTTCTC AAAAAATAGA TGATAAGGAA GTGAAGGCAT TTTTGGACAC AAAATATGCT 
CTAGAGAGAA AAGTCGAGCA TGCTCAAACT AAAAGAAGAT ATTATGAGTA TGCAGATAGC 
AAAATGGATT TACTAAAATT AGTTGCTTCA GAGCATTTTT ATTTTTGTGT ATTTGAGCTT 
GAAAAAATTT TTATACAAGG TGCGCAAAGC TCTAAAATAA AAAAAGTTGT TGATGATGCA 
ATTGATCTTT TAAAAGCTGA TTCTAGGTTT AATTTTTCGT TAGAAAAAGA AAAAATTTCT 
AATGTAGAGC AAATAAAAGC CTTAGACACC AAGGAAGACA ATTTAAAAAC TACTATAAAA 
TCATATAATG AAATTTTACT TTATCTAAGA AATAATGCAA AGTTGTTAGA AACTAATTTT 
TTATTTAATG AATTAGGTTT ACAAAATGCC ATTAATTTTA TTAACGAGCA AGCTTCGTTT 
GAAAATATAA ATCTTGGAAA AATTGTTATA TCGATTTTAG TGATAGTATT TTTTTACTCG 
TTAAAATTTT ATCTTGCAAA AATTTTATCT TTTATTTTGA TGAAATTGTT CAGACAAAAC 
TCATCTAATT TAGATCTTAA AACTCATTTT CTTTCAAAAT TACAAAATCC CATAGGTTGG 
TTTTTATTTG TTTATGCTTT AGGAATTTGT TTTACTATTA TTTATTATCC TGTTCCAGTG 
GATATAAGAA TAGGAAATGT ATTATATATT GTATATGCTA TTTTAACTGC ATGGATTATT 
ATTAGTATTT TTGATAGTTA TGGTATGGTG ATTGTTTCGA AGCTTGCTGA AAAAAGTGGT 
AAAAGAGAAG TTGTAAATTT AGTTATTAAA ATTTTATATT TTATTATTAT TGTTATTGCT 
GCTTTATTTA TTTTAGCTCA TCTTGGTTTT AATATTTCTG CATTAATCGC ATCTTTAGGA 
ATCGGTGGTT TGGCTGTGGC ATTGGCAGCT AAGGATATTA TTGCAAATTT CTTTGCTTCT 
GTGCTTTTGC TTTTTGATAA TAGTTTTAAT CAAGGTGATT GGGTGGAAAT TTCTGGGGTA 
GAAGGAACTA TAGTAGAAAT TGGACTTAGA AAAACGACCA TTAGAACTTT TGATAATTCT 
TTAGTATTTT TACCAAACTC AACCATCATG GGGACCAATA TCAAAAATTG GAGTAAAAGA 
AAAATAGGAC GCCATGTAAA ATTATATGTA GGTGTAACTT ATGATGCAAA ACCACATCAA 
CTAGAGCAGG TTGTAGAAGA TATTAGATAC TTACTTGCTA CTAGTCCATT AATAGCTCAA 
GTAGATGATA GTGCGTTAAA ACTTGGCGGA TCAAGAGTAA GATATAGACA AAATTTAGTT 
TCAGTTAATG ATTTAGAAGG TTATAAAAAT AATACCTATG TAGCAGTAAG TGGTTTTGGT 
GCTAGTTCTA TCGATATAGA GGTGTATTTC TATACCAAAG CAGTTGATGC AGCAGGTTTT 
AGAGAAGCTA GACAAAGCAT TTTACTTGAA ATTATGAAAA TTGTAGACAA AAATAAACTA 
AGCTTTGCTT TCCCGTCGCA AAGTCTTTAT ATAGAAAAAA TTAACACTCA AACGAAAGAA 
GAGTTATTAA CCTAA 

 

Protein sequence

MKKIIVFLLF FLFVNFSNAN EDNATNIDKN SIFALVQNYV ELNFVLESYS GSDLNSSEYQ 
DNIREIEKQK QDILTKIPLR MISQKIDDKE VKAFLDTKYA LERKVEHAQT KRRYYEYADS 
KMDLLKLVAS EHFYFCVFEL EKIFIQGAQS SKIKKVVDDA IDLLKADSRF NFSLEKEKIS 
NVEQIKALDT KEDNLKTTIK SYNEILLYLR NNAKLLETNF LFNELGLQNA INFINEQASF 
ENINLGKIVI SILVIVFFYS LKFYLAKILS FILMKLFRQN SSNLDLKTHF LSKLQNPIGW 
FLFVYALGIC FTIIYYPVPV DIRIGNVLYI VYAILTAWII ISIFDSYGMV IVSKLAEKSG 
KREVVNLVIK ILYFIIIVIA ALFILAHLGF NISALIASLG IGGLAVALAA KDIIANFFAS 
VLLLFDNSFN QGDWVEISGV EGTIVEIGLR KTTIRTFDNS LVFLPNSTIM GTNIKNWSKR 
KIGRHVKLYV GVTYDAKPHQ LEQVVEDIRY LLATSPLIAQ VDDSALKLGG SRVRYRQNLV 
SVNDLEGYKN NTYVAVSGFG ASSIDIEVYF YTKAVDAAGF REARQSILLE IMKIVDKNKL 
SFAFPSQSLY IEKINTQTKE ELLT