Gene Cla_1488 details

Gene Information

• Locus tag: Cla_1488
• Symbol: nhaA1
• ID: 7411234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1431850
• End bp: 1433010
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643718610
• Product: Na+/H+ antiporter
• Protein accession: YP_002576045
• Protein GI: 222824471
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAC TTCAAACCTT TGTTAAAAGT GAAACTTTTC CTGGTGTTTT GCTAATATTT 
TTTACCGTAC TTGCACTAAT TTTACAGAAT AGTTCTTTAA CGGATCAATA TACCAATTTT 
TTAAATATTC CTTTTGGCTT TCAAGCAGGA AGTTTAGAAA TTTTCAAACC ATTGCTTTTA 
TGGATTAATG ATGGCCTTAT TGCAATCTTT TTCTTTGCCA TAGGACTTGA ATTAAAATAT 
GAAGTAACAA GAGGACAACT CAATAGCATA AAAGCTATGT CATTACCTGT ATTTGCTGCA 
CTTGGTGGTA TGGTAGTACC TGCTTTGATT TTTGCATTTT TTAACTATAA AGACCCTTTT 
GCTTTGCAAG GTTGGGCTAT ACCAACGGCT ACTGATGTGG CTTTTGCGGT TGGCATTTTA 
ATGCTTTTAG GCAAAAGAGT ACCTACTTCT TTAAAATTAT TTTTACTCTC TTTAGCAATT 
TTTGATGATT TGGGCGCGAT TATTGTGATT GCTTTATTTT ATACAAGCGA ACTTTCAGTT 
TTTGCTATGA TTGCTGCTTT AGTGTGTATT CTAGCGCTTT ATTTGTTAAA TCATTTCCAT 
GTTACCAAAA AATCTTTTTA TATCATCATA GCTATAGTAT TTTGGATAAG TATGCTAAAA 
AGCGGGGTGC ATGCAACTTT AGCAGGTGTG ATTACTGCTT TATTTATACC ACTTCAAACA 
AAAAGTGGTG AGTCTTTTTT AAAAGAAATA GAACATGACT TAGCGCCTTG GGTGAGTTAT 
TTCATCTTGC CTATTTTTGC TTTTGCAAAT GCGGGAGTTG ATTTAAAAGA CATGGATCCA 
AGCTTTATGT TTTCTTCAGT TAGCTTAGGT ATTATCTTAG GATTATTTTT AGGAAAACAA 
ATTGGAGTAT TTTTATTTTC ATATATTAGT ATAAAACTGG GCCTAGCAAA ACTTCCACAA 
AATGTTAATT TCAAACAACT TTATGGGGTT TGTATACTCA CAGGTATAGG TTTTACTATG 
AGCTTTTTTA TAGATGGCCT AGCTTATCAA AATAGTGATA TTTTTGCATA TTCAGACAAA 
CTTGCAATTT TAATAGCTTC ATTATTAAGC GCTATAGTTG GATATGCCTA CTTAAAACTT 
ATTTATAGTT TTAAAAAATG A 

 

Protein sequence

MQKLQTFVKS ETFPGVLLIF FTVLALILQN SSLTDQYTNF LNIPFGFQAG SLEIFKPLLL 
WINDGLIAIF FFAIGLELKY EVTRGQLNSI KAMSLPVFAA LGGMVVPALI FAFFNYKDPF 
ALQGWAIPTA TDVAFAVGIL MLLGKRVPTS LKLFLLSLAI FDDLGAIIVI ALFYTSELSV 
FAMIAALVCI LALYLLNHFH VTKKSFYIII AIVFWISMLK SGVHATLAGV ITALFIPLQT 
KSGESFLKEI EHDLAPWVSY FILPIFAFAN AGVDLKDMDP SFMFSSVSLG IILGLFLGKQ 
IGVFLFSYIS IKLGLAKLPQ NVNFKQLYGV CILTGIGFTM SFFIDGLAYQ NSDIFAYSDK 
LAILIASLLS AIVGYAYLKL IYSFKK