Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1457 |
Symbol | |
ID | 7409964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1399699 |
End bp | 1403469 |
Gene Length | 3771 bp |
Protein Length | 1256 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643718579 |
Product | type IIS restriction/modification enzyme |
Protein accession | YP_002576024 |
Protein GI | 222824450 |
COG category | [V] Defense mechanisms |
COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA TATCGATTTT AAATGAAAAA GATTTTTTTA ATCCATACTA CCGCAAAAAA CAAATTCTAA AAGATGATTT TGAAAAATTT TCAAAAATAT TAAGCGAGTA TATGCAAATT CTTTGTGAAT TTCATGAGCA AAATGAAGAT TATTTAGTAG CTAATGCTTT GAGCGTGTTT TTAACAAAAT TAAATTTTAA AAGCATTGTA AAGTCAAAAC AAAAAGGCAA AAGCGAGATA GACTTAGCCA TCATCAAAGA TGAGTTAAGC AAGGACTTAG AAGTTCTTAT CGAAGCTAAA AAGCCAAATT CAAAAGAATT TATAAGCGAT ACTAAGCCAA ATTCCAAAGC CTTGCACGAG GCTATTTTGT ATTATTTTAG AAATAGAGAG CATTCTTTTT CGCTTAAATT TATCATCATC ACTGATTTTT ATAAATTTTA TATTTTTAAA GCTAGTGAAT TTGAAGAGCT TTTTTACAAA AATTCTGAAT TTAAAAAACT TTATAAAGAA TTTACTAGCC AAAATTCACT CTTTAAGGGC AACACGGAAG AATTTTACAA AGAAGCAGCC AAACTCATAG AAAATTTTGA TGAAAATTTA AAAGCGATTT TTGTGGATTT ATCGCCATTT GCAAACAAGC AAAATTTAAA TTTTAAAAAT CTCTCAAGCA TTTTTAAAAT TTTCAACAAA GACTTTTTGC TAAACGAATT TAGCCCAAAT GATGCCAACA CACTCAATGC AAAATTTTAT AAAGAACTTT TATACATACT AGGCTTACAA GAAGTAAAAA ACATCATCAC ACAAAGTGAG CAAAGCAAAC AAGGTTTTGG CACACTTTAT AATGCTATAG AAAGTAAATT AAAAGATAAA AACTTTGAAG CCACGCTAAA ATTCATCATA CTTTGGCTAA ATAGAATTTT GTTTTTAAAG CTTATAGAAT CAAACCTTGT AAGATTTAAC GATGATAAAA ATTTAAAATT TTTAAACTAT GAAAAAATTC CAAATTTCAC CACACTTTCA CATCTTTTCT TTGATATCTT AGCTAAAGAA AAGCACACAA GAGCGCAGAG TAAATTTAGC TATTTGCCTT ATTTAAATTC ATCGCTTTTT GAAAAGCAAG ATATGGAAAA ATTTACATTA GAAATTTCTA GCTTGGAAAA TGATAGTATT TTGGATTATT ACCCTGATAC TCAAATTTAT GATGAAACTG GCAAAAAGAA AAAAGGTAGT GTAAATTTAC TTCAGTATTT GTTTGAATTT TTAGACAGCT TTGACTTTGG CACTGATGAG CAAAGTGAAG AGCTCATAAA GCAAAAAGAG CTTATAAATT CAAGCGTGCT AGGAAATGTC TTTGAAAAGC TAAATGGCTA TAAAGAAGGT AGTTTTTATA CCCCAAGCTT TATCACTTCA TATATGTGTA AAGCAAGCAT AGAAAAAGTC GTGCTAGATA AGTTTAACCA TACTTTTAAG CTAAATGCCA CCAAGCTAAG CGAGCTAAGA ACCCAGTTGC GTCAAGAAAA AATCTCTAAA GAGCAAAAAC TAGCCTTGCT AAATTCCATA CGCATTTGCG ATCCTGCGGT GGGAAGTGGG CATTTTTTAG TTTCAGCTTT AAATGCCATG CTTATGGTGC ATTATGAGCT TGGTTTATTT GAAGAGGACT TTTACCTAAG CGTGCAAAAT GATGAAATTT TAGTGCAAAA TCACAAAGGC CAGTTTTTAG AGTATAAACG CCCTGATTTT GACAAAGACA AAACCCATCT TTGTCAAAAA GAACTTTTTG AGCGTAAAAA AGACATCATA GAAAACAACC TTTTTGGAGT AGATATCAAC CCAAACTCAT GCGAGATCAC AAAGCTTCGC CTTTGGATAG AGCTTTTAAA ACACAGCTTT TATGAAAGCT TTGATGATGC AAACTATCAT GATCTTAAAA CCCTACCAAA CATCGATATC AACATAAAAT GCGGGAATTC TTTAATAAGC TATTTTGAAA TTCACAAAAG CCTTTCTCAC TACCCAAACA TCAAAGAACG CATGGATAAA TACAAACGCA TAGTCAAAGA CTATAAAGAA GGCTTTTACA CCGACAAAAC TCTCATCGCA AAAGAGATCA AAAACCTCAA AGAGTCTTTT AAAAATTTCT GCTTAAAAGA CAAATTTGCC AAAGAGATCA AGCAACTTAC CAACGGCGCT AATGAATACT CTAAAAAATA CGGCGATTTT TTAGCACAAG ATGAAAAAGA TGAGAATTTT AGAGCATTTT TCTCTAAAAA TATGTTTGAA TTTGACTTTG ATGAAAGTGA GGCTAAGAAA GAATTTAAAA AGCTTAAAAA GCTTTATGAG AGTATATTTG ACTTAGAAAG TGCAAATCCT TTTGAATGGC GTTTTGAATT TAGTGAAGTG CTTGATGAGG GCGGGAGCTT TCAAGGGTTT GATCTCATCA TTGGTAATCC ACCTTATATA AAAGAAAATG ATAATAAAGA AATTTTTGCA AATACTAAAA ATTTAAGAAC TTATCAAGGT AAAATGGATA TTTGGTATCA TTTTGTGGGG CGTGGTTTAG ATATACTGAA AGAAAATGGA ATTTTATCTT TTATTGCCAC AAACAATTGG ACTACAAATT CGGGTGCTAA AAAATTACGC AATGTTATAT TAGAAGAGTG TCAAATTTTA AATCTTGTCG ATTTTTCTTC ATTTATGGTT TTTGATTCTG CAAGCATACA AACTATGATA ATGCAATTTC AAAAAACAAA ACCACCTAAA AATTATGAAT TTAATTTTGC AAAACTTACT ACACAAAGTC CAAGTTATGA AGATGTTTTG GATATTTTAA AAAATACAAA GTCACCTAAT AATGAAATTT TAAATATAAA TTTTAAGCCA AAGAATTTCA TAGATAAAAC TTTGAATTTT ATAAAAAATG ATTATGAAGA GATATTTGAA AAAATTCAAA AATATGGAAA ATTTTACCTT GATGATAAAG AAGTAGCACA AGGAATAGTT TATCCGCAAG AGAATGTAAA TAAGAAATCT TTAGAGATCT TAGGAAAAAA TTTTTATATA GGACAAGGTA TTCAAAAGCT AACAGATGGA GAAGTTGAAA AACTAAATCT TTTAAAAAAT GAAAAAAATC TATTAAAACC TATCTTTGAA AGTAACAGTG TAGAAAAATA TTACACCAAA AAAGATAATG ATTTTTGGGT TATTTATACA AATTCATCTT TCAAAAATCC AAATTCTATG GATAATTATC CAAACTTAAA AAAACATTTA GATAAATTTA AAAAAGTTAT TACTTCAGAT AACAAACCTT ATGGACTACA TAGGGCTAGA GATGAAAAAT TTTTTACAGG TAGTCCTAGA ATAGTAGCTT TAAGAAAATG CGTAAATGAA CCTAAATTTA GTTATGTTGA TTTTGATTGT TATGTTTCGG CGACTTTTTA TGTTATAAAA ACACAAAGAA TTGATACAAA GTATCTAGTT GCTATTTTAA ATTCAAAACT TATGATGTTT TGGTTAAAAC ATAAAGGAAA AATGCAAGGC AATAATTATC AAATAAATAA AGAGCCTTTG TTAAATATTC CTATAGTGGA TATAAATTCT AAAAATGAAA AACTAGCAAG CAAGCTTATA AGCTTAGTCG ATGAGATTTT AATTTTAAAA GAACAAGACA AAAAAGCAAA CACCAAAACC CAAGAAGATA AAATAAACTC TATCGTTTAT AAACTTTACA ACCTAAACGA AGAAGAAATA AAAATAATTG AAGGTAAGTA A
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Protein sequence | MMNISILNEK DFFNPYYRKK QILKDDFEKF SKILSEYMQI LCEFHEQNED YLVANALSVF LTKLNFKSIV KSKQKGKSEI DLAIIKDELS KDLEVLIEAK KPNSKEFISD TKPNSKALHE AILYYFRNRE HSFSLKFIII TDFYKFYIFK ASEFEELFYK NSEFKKLYKE FTSQNSLFKG NTEEFYKEAA KLIENFDENL KAIFVDLSPF ANKQNLNFKN LSSIFKIFNK DFLLNEFSPN DANTLNAKFY KELLYILGLQ EVKNIITQSE QSKQGFGTLY NAIESKLKDK NFEATLKFII LWLNRILFLK LIESNLVRFN DDKNLKFLNY EKIPNFTTLS HLFFDILAKE KHTRAQSKFS YLPYLNSSLF EKQDMEKFTL EISSLENDSI LDYYPDTQIY DETGKKKKGS VNLLQYLFEF LDSFDFGTDE QSEELIKQKE LINSSVLGNV FEKLNGYKEG SFYTPSFITS YMCKASIEKV VLDKFNHTFK LNATKLSELR TQLRQEKISK EQKLALLNSI RICDPAVGSG HFLVSALNAM LMVHYELGLF EEDFYLSVQN DEILVQNHKG QFLEYKRPDF DKDKTHLCQK ELFERKKDII ENNLFGVDIN PNSCEITKLR LWIELLKHSF YESFDDANYH DLKTLPNIDI NIKCGNSLIS YFEIHKSLSH YPNIKERMDK YKRIVKDYKE GFYTDKTLIA KEIKNLKESF KNFCLKDKFA KEIKQLTNGA NEYSKKYGDF LAQDEKDENF RAFFSKNMFE FDFDESEAKK EFKKLKKLYE SIFDLESANP FEWRFEFSEV LDEGGSFQGF DLIIGNPPYI KENDNKEIFA NTKNLRTYQG KMDIWYHFVG RGLDILKENG ILSFIATNNW TTNSGAKKLR NVILEECQIL NLVDFSSFMV FDSASIQTMI MQFQKTKPPK NYEFNFAKLT TQSPSYEDVL DILKNTKSPN NEILNINFKP KNFIDKTLNF IKNDYEEIFE KIQKYGKFYL DDKEVAQGIV YPQENVNKKS LEILGKNFYI GQGIQKLTDG EVEKLNLLKN EKNLLKPIFE SNSVEKYYTK KDNDFWVIYT NSSFKNPNSM DNYPNLKKHL DKFKKVITSD NKPYGLHRAR DEKFFTGSPR IVALRKCVNE PKFSYVDFDC YVSATFYVIK TQRIDTKYLV AILNSKLMMF WLKHKGKMQG NNYQINKEPL LNIPIVDINS KNEKLASKLI SLVDEILILK EQDKKANTKT QEDKINSIVY KLYNLNEEEI KIIEGK
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