Gene Cla_1395 details

Gene Information

• Locus tag: Cla_1395
• Symbol: carB
• ID: 7409901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1341550
• End bp: 1344813
• Gene Length: 3264 bp
• Protein Length: 1087 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643718517
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_002575962
• Protein GI: 222824388
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.943513
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAA GAACAGATAT AGAAAATATA TTATTAATAG GCAGTGGGCC TATCGTTATA 
GGTCAAGCTT GTGAGTTTGA TTACTCAGGG ACTCAAGCAG CAAAAACCTT AAAAGAGTTA 
GGGTATAGAG TAGTTTTAAT CAATTCCAAT CCAGCTACGA TTATGACAGA TCCTGAATTT 
GCTGATGCAA CTTATATAGA ACCAATTACT AAAGAAAGCA TTTTAAGCAT TATAAAAAAA 
GAAAAAATTG ATGCGATTTT GCCTACTATG GGTGGTCAAG TAGCGCTTAA TGTTGCTATG 
GAAGTTTATG AAAGCGGTGA GCTTGGCGAT GTGAAATTTT TAGGAGCAAA TCCGCAAGCT 
ATCAAAAAAG GCGAAGATAG ACAAATTTTT AAAGAAAGCA TGAAAAAAAT TGGCATGGAC 
TTGCCAAAAT CTATGTATGC GTATAATTAT GAAGAAGCCT TAAAAGCAGT TGAAGAAATT 
GGTTTTCCTT TGATGATAAG AGCTTCTTTT ACTTTAGGTG GTGCAGGAAG TGGTGTGGTT 
TATAATATGG ATGAATTTGC AGAGCTTGCA AATACTGCAT TAGCACTAAG TCCAATCCAT 
GAAATTTTAA TAGAAGAAAG TTTGCTTGGT TGGAAAGAAT ATGAAATGGA AGTTATCAGA 
GATAAAAATG ATAATTGCAT TATAGTTTGT TCTATTGAAA ATGTTGATCC TATGGGGGTT 
CATACGGGCG ATTCTATCAC TATAGCTCCA GCTTTAACTT TGACTGATAA AGAATATCAA 
GCTATGCGTA ATGCATCTTT TGCTATTTTA AGAGAAATTG GAGTAGATAC AGGTGGATCA 
AATGTGCAAT TTGCTATAAA TCCAACTAAT GGTAGAATGA TAGTTATAGA AATGAATCCT 
AGGGTTTCTA GATCTTCAGC TCTTGCAAGC AAGGCAACAG GCTATCCTAT AGCAAAAATA 
GCCACACTTT TAGCAGTTGG TTTTAGTTTA GACGAAATTA AAAATGATAT CACAGGAACT 
CCAGCTTCAT TTGAACCAGT AATTGATTAT ATAGTTACTA AAATTCCTCG TTTTACTTTT 
GAAAAATTCC CAAATGCAAG TACTGAGCTT GGTACATCTA TGAAGAGTGT GGGTGAGGTT 
ATGGCTATAG GAAGAACCTT TAAAGAAAGT ATTCAAAAAG CACTTTGCTC ACTTGAGAGA 
AATTTAAGTG GGTTTGATGT TATAGAATGT GATAAAAATG AACTTATAGC AAAAATTCGT 
CATGCAAATG AAAAACGCTT ACTTTATATA GCGCAAGCTT TTAGAGAAGG TTTTAGCACG 
CAAGAACTTT TTGAGCTTTG TAAAATAGAT CCTTGGTTTT TAAATCAAAT CAAAGAAATA 
GTGGAATTTG AAAATCAAAT AGATATGGAT ATTTTGAGCA ATAAACAACT ATTAAGAAAA 
GCTAAAACCT TAGGTTTTTC GGACAAAAAA ATCGCTAGCT TGATTAACCA AAAAGATAAT 
CTTGAGTTAA GCCAAAATGA TATTTATTAT GCAAGAATTA AACACAAAAT CATCGCTCAA 
TATAGTGAAG TAGATACTTG TGCAGGCGAA TTTGAGGCAC TAACTCCGTA TTTATACTCA 
AGTATTAATA CAAATGAAGC TACTCAAATA AAAGAGAGTA AAGATAAAAA AGATAAAAAA 
GTGATGATTA TAGGTGGTGG ACCAAACCGT ATAGGACAAG GCATTGAGTT TGATTATGCT 
TGCGTGCATG CTTCTTTTGC TCTAAAAGAT ATGGGCGTAA AAACTATAAT GTATAATTGC 
AACCCAGAAA CGGTTTCAAC AGATTATGAT ACAAGTGATA TTTTGTATTT TGAGCCAATT 
GATTTTGAGC ATTTAAGAGC GGTTATTGAT AGAGAAAGAC CCGATGGAGT GATAGTTCAT 
TTTGGTGGTC AAACTCCGCT TAAATTTGCA AAACGCCTTA GTGCTTTTGG GGCAAAAATC 
ATAGGAACAA GTGCAAGAGT TATTGATTTA GCTGAAGATA GAAAGAAATT TGCTAAATTT 
ATTGAAGATC TAGGTATAAA TCAACCAAAA AATGGCACAG CCATAAGTGT AGAAGAGGCT 
ATTATAAAAG CAAATGAGAT AGGTTATCCT GTGCTTGTTA GGCCAAGCTA TGTTTTGGGT 
GGTCGAGCAA TGCGTGTAGT GCATGATGAG AGCGAGCTTA GGCTTTATAT GCAAGAAGCG 
GTGGATGTAA GTGATAAATC TCCTGTATTA ATCGATCAAT TTTTAGATAA TGCAACCGAG 
CTTGATGTGG ATGCAATAAG TGATGGAAAA GATGTATATG TAGCAGGTAT TATGGAGCAT 
ATTGAAGAAG CAGGAATTCA TTCAGGTGAT AGTGCTTGTT CTTTACCTGC TATAAATATA 
GATGAAACTA TGCTTGAAAT GATTGAGCAA AAAACAAAAG ATATTGCTTT AAATTTAGGC 
GTAGTAGGAC TTTTAAATAT ACAATTTGCT ATACATGATA ATAAGCTTTA TATGATAGAG 
GTAAATCCAA GAGCAAGTAG AACCGTGCCT TTTGTAAGTA AAGCTACAGG AATTCCTTTA 
GCAAAGGTTG CAACGCGTGT GATGTGGCAA GGAAATTTAA GAGAAAGTTT GAAATTTTAT 
GATATTTTCA AAGTAGTAGA AGAAAAAAAT GGAATTTTAA GAGCTAAAAA ACCAAAACAC 
ATTAGCGTAA AATCAGTGGT ATTTCCTTTT GCAAAACTTA GCGGAAGTGA TCTTGAGCTT 
GGGCCTGAGA TGCGTTCAAC TGGTGAAGTT ATGGGTATTA GCAAAGATTT TGAAAACTCA 
TATGCAAAAA GTCAGCTTGC ATCATCAAAT TTCTTACCAG AAAGTGGAAA TGTGTTTTTA 
TCATTAAGAG AGCAAGATAA AAAATATGCA GTAGATTTAG CTAGCGAGTA TATTAAACTA 
GGATTTAAAA TCATAGCTAC AAGCGGCACT TATAAAATTT TACAAGAAGC AGGTTTAGAA 
TGTGAGTTTG TACATAAAAT TTCTGAAGGA CGCCCAAATG TAGAGGATAA GTTAAAAAAT 
TCTCAAATTC AACTTGCTAT TAATACAAGT GATGAGCATA GTTTTAAAGG CGATACTAAA 
AAAATCAGAG CAAATATTTT ACGCTTTAAA ACCCCATATT TTACAAATTT AAGAGCAGCG 
TATGCAGGCG CAAAAGCAAT TAAAGCTATA CAAAATAAAA CTTGCCTTGA AGTAAAGAGC 
TTACAAGAAT ACTTAAAGGT ATGA 

 

Protein sequence

MPKRTDIENI LLIGSGPIVI GQACEFDYSG TQAAKTLKEL GYRVVLINSN PATIMTDPEF 
ADATYIEPIT KESILSIIKK EKIDAILPTM GGQVALNVAM EVYESGELGD VKFLGANPQA 
IKKGEDRQIF KESMKKIGMD LPKSMYAYNY EEALKAVEEI GFPLMIRASF TLGGAGSGVV 
YNMDEFAELA NTALALSPIH EILIEESLLG WKEYEMEVIR DKNDNCIIVC SIENVDPMGV 
HTGDSITIAP ALTLTDKEYQ AMRNASFAIL REIGVDTGGS NVQFAINPTN GRMIVIEMNP 
RVSRSSALAS KATGYPIAKI ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF 
EKFPNASTEL GTSMKSVGEV MAIGRTFKES IQKALCSLER NLSGFDVIEC DKNELIAKIR 
HANEKRLLYI AQAFREGFST QELFELCKID PWFLNQIKEI VEFENQIDMD ILSNKQLLRK 
AKTLGFSDKK IASLINQKDN LELSQNDIYY ARIKHKIIAQ YSEVDTCAGE FEALTPYLYS 
SINTNEATQI KESKDKKDKK VMIIGGGPNR IGQGIEFDYA CVHASFALKD MGVKTIMYNC 
NPETVSTDYD TSDILYFEPI DFEHLRAVID RERPDGVIVH FGGQTPLKFA KRLSAFGAKI 
IGTSARVIDL AEDRKKFAKF IEDLGINQPK NGTAISVEEA IIKANEIGYP VLVRPSYVLG 
GRAMRVVHDE SELRLYMQEA VDVSDKSPVL IDQFLDNATE LDVDAISDGK DVYVAGIMEH 
IEEAGIHSGD SACSLPAINI DETMLEMIEQ KTKDIALNLG VVGLLNIQFA IHDNKLYMIE 
VNPRASRTVP FVSKATGIPL AKVATRVMWQ GNLRESLKFY DIFKVVEEKN GILRAKKPKH 
ISVKSVVFPF AKLSGSDLEL GPEMRSTGEV MGISKDFENS YAKSQLASSN FLPESGNVFL 
SLREQDKKYA VDLASEYIKL GFKIIATSGT YKILQEAGLE CEFVHKISEG RPNVEDKLKN 
SQIQLAINTS DEHSFKGDTK KIRANILRFK TPYFTNLRAA YAGAKAIKAI QNKTCLEVKS 
LQEYLKV