Gene Cla_1375 details

Gene Information

• Locus tag: Cla_1375
• Symbol: cdtB
• ID: 7409881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1325341
• End bp: 1326120
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643718497
• Product: cytolethal distending toxin, subunit CdtB
• Protein accession: YP_002575942
• Protein GI: 222824368

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTTTCA ATTTATTATT TGGTGTTTTA GAAAATTATA ATAGTGGTAC TTGGAATTTA 
CAAGGTGCAT CAGCTTCTAC TGAAAGTAAG TGGAATATTA GCATAAGACA ACTTGTAACT 
GGTGCTAATC CTATGGATAT TTTGGCTGTT CAAGAAGCAG GTGTTTTGCC AAGTACCGCT 
ATAATGACGC CAAGACAAGT TCAACCTGTG GGAGTTGGCA TTCCTATTCA TGAGTATGAA 
TGGAATTTGG GCTCATCAAG TCGTCCAAAT TCAGTTTATA TATACTACTC AAGAGTTGAT 
GTTGGGGCAA ATCGCGTAAA TATGGCTATT GTGAGTAGAA TGAGAGCAGA TGAAGTTTAT 
GTTTTGCCGC CTCCAACTGT GGCTTCAAGA CCTATTATAG GAATTCGCAT AGGAAATGAT 
GCATTTTTTA GTATCCATGC TTTATCAAGA GGTGGTAATG ATGGAGGGGC TATCGTGAGT 
GCTGTAGATA TGCATTTTAG AAATATGCCA CATATTAATT GGATGATTAT GGGAGATTTT 
AATAGAACCC CCGGTTCTCT TATAGGCCTA CTTGATCCAG ATTTAAGATC GCGTATTAAC 
GTAGTTTCAC CTCCATCTTT TACGCAAACA AGTGGCAATA CAATTGATTA TGCAATTACA 
GGAAATTCAA GTACCACATC TTTATATAAT CCGCCTAGAA TTCTTGCAAT CTTAGCTGTA 
GCAGGACTTA GGACTTTTTT AGCTTCGGAT CATTTTCCTG TGAATTTTAG AAGACCTTAG 

 

Protein sequence

MSFNLLFGVL ENYNSGTWNL QGASASTESK WNISIRQLVT GANPMDILAV QEAGVLPSTA 
IMTPRQVQPV GVGIPIHEYE WNLGSSSRPN SVYIYYSRVD VGANRVNMAI VSRMRADEVY 
VLPPPTVASR PIIGIRIGND AFFSIHALSR GGNDGGAIVS AVDMHFRNMP HINWMIMGDF 
NRTPGSLIGL LDPDLRSRIN VVSPPSFTQT SGNTIDYAIT GNSSTTSLYN PPRILAILAV 
AGLRTFLASD HFPVNFRRP