Gene Cla_1374 details

Gene Information

• Locus tag: Cla_1374
• Symbol: cdtC
• ID: 7409880
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1324759
• End bp: 1325331
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643718496
• Product: cytolethal distending toxin, subunit CdtC
• Protein accession: YP_002575941
• Protein GI: 222824367

Plasmid Coverage information

• Num covering plasmid clones: 65
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA TTTGTATTTT ATTTTTTACT ATTTTAAGTT TTTTAAGAGC TGATACCTTC 
TTTGATGATT TGGAAGACTT CACTCCTATG TTTGCTATAA GGTCTTTAGA AACAGGAATT 
TCACTAAGTC CTTTTAGATA TAGTTCTGAT AAATTGGAAG AGCAAAATTG GTTTTTAAAA 
GAAATAATAC TTAGTGATGA GTTAAAGAAA AAAGATAGAT ATGCAGTGCA ACGTCCTTTT 
GGTTATGTGC AGTTTATAAA TCCTAGAGGT GCTGATGTGT GTTTGGCTGT TTTGGATGAA 
AAAACTTTTG GGACAAAATC TTGTAAGCAA GATTTACAAG ATGGGCAAAT GCAAACAGTT 
TTTTCTGTTA TGCCTACAAC AAATGGTGCT GTACAAATTA GGTCTTTGAC ACGAGGCGGG 
GTAAAATGTA TGAGTACTTT TTATGATGCA TATATACCTA TAGAAAATCG CTTTGGCTTA 
GATGATTGTA CCGTAAATCC TTCTGTGCCT ATAGAATTAA AAGAGTTATT TTTCTTTGCT 
CCTGCTATCG TTGAAGCAAC TCCACTTTAT TAA 

 

Protein sequence

MRKICILFFT ILSFLRADTF FDDLEDFTPM FAIRSLETGI SLSPFRYSSD KLEEQNWFLK 
EIILSDELKK KDRYAVQRPF GYVQFINPRG ADVCLAVLDE KTFGTKSCKQ DLQDGQMQTV 
FSVMPTTNGA VQIRSLTRGG VKCMSTFYDA YIPIENRFGL DDCTVNPSVP IELKELFFFA 
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