Gene Cla_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1362 
SymbollysA 
ID7409868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1313568 
End bp1314773 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content30% 
IMG OID643718484 
Productdiaminopimelate decarboxylase 
Protein accessionYP_002575929 
Protein GI222824355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.884156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATT TAAAATTAGC AAAGCAATAT AACACTCCTT TTTATATTTA TGATTTTGAT 
AAAATCAAAG AGCGTTTTTT ACTACTAAAA GAAGCTTTTA AAGCAAGAAA ATCACAAATT
TTTTATGCAG TTAAAGCAAA TTCAAATTTA AGTGTTTTAA AACTTTTAGT TTCTTTAGAT
AGTGGATTTG ATTGTGTTAG TGCGGGTGAG ATTTATAGAG CTTTAAAAGC AGGTGCTAAA
AATTATAAAA TTATTTTTAG TGGGGTAGGT AAAAGTGCTG ATGAGTTAAA ATATGCTCTA
GAGCAAAATA TACTTTATGT AAATTTAGAA AGTTATGAAG AAATGCTTCT TTTGGAACAA
ATTGCTAAAG AAAGTCAAAA GATAGCTCGT ATAAGCATAA GAGTAAATCC AAATGTAGAT
GCAAAAACCC ATCCTTACAT ATCTACAGGG CTTCATGAAA ATAAATTTGG TGTAGATATA
GAAAGTGCTA AAAAAATGTA TATTTATGCT AAAAATTCAC AATTTTTAGA TCCAGTTAGC
GTGCATTTTC ACATAGGCTC ACAAATTCTT GATATAAGTA GTATTCATGA AGCTTCTGTA
ATTGTTGCAA AATTAGTAAA AGAGCTTTTG GTTTTAAAAA TTAATATTAA GTTCTTTGAT
ATAGGTGGTG GCTTAGGGGT TTGTTATAAA GATGAGCAAG AACCAAATTT ATATGATTAT
GCTCAAGGAA TTTTAGCAAG CTTGCAAGGA CTTGATGTAT GTATAGGCAT GGAACCTGGT
AGATTTTTAG TGGCAAATGC AGGGGAGTTT ATTACTAAAG TTTTATATGA AAAATTTAAT
GATAAAAAGC GTTTTGTGAT TGTTGATGGG GCGATGAATG ATTTATTGCG TCCAAGCTTA
TATAGTGCTT ATCATGAAGT CAAGCTTTTG AGTGAAAATA AAGAAGAAAG CCTTTGTGAT
ATTGTTGGTG GGGTTTGTGA AAGTGGTGAT TTTTTAGCTA AAGATAGAAA ACTAGCTAAG
ACAAAAGCAG GAGATTTGAT CATAGTTAAA AGCGCAGGTG CATATGGCTT TAGCATGAGT
AGTAATTATA ATACTCGCAA TAGAGTATGT GAGCTAGCTT GTGAAAATGG CATGGTAAGA
ATGATTAGAA AAAGAGAAAG TTATGAGGAT CAAATTGCTT TAGAGCTTGA TTTTTTAAAG
GATTAA
 
Protein sequence
MDYLKLAKQY NTPFYIYDFD KIKERFLLLK EAFKARKSQI FYAVKANSNL SVLKLLVSLD 
SGFDCVSAGE IYRALKAGAK NYKIIFSGVG KSADELKYAL EQNILYVNLE SYEEMLLLEQ
IAKESQKIAR ISIRVNPNVD AKTHPYISTG LHENKFGVDI ESAKKMYIYA KNSQFLDPVS
VHFHIGSQIL DISSIHEASV IVAKLVKELL VLKINIKFFD IGGGLGVCYK DEQEPNLYDY
AQGILASLQG LDVCIGMEPG RFLVANAGEF ITKVLYEKFN DKKRFVIVDG AMNDLLRPSL
YSAYHEVKLL SENKEESLCD IVGGVCESGD FLAKDRKLAK TKAGDLIIVK SAGAYGFSMS
SNYNTRNRVC ELACENGMVR MIRKRESYED QIALELDFLK D