Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1362 |
Symbol | lysA |
ID | 7409868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1313568 |
End bp | 1314773 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643718484 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002575929 |
Protein GI | 222824355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.884156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATT TAAAATTAGC AAAGCAATAT AACACTCCTT TTTATATTTA TGATTTTGAT AAAATCAAAG AGCGTTTTTT ACTACTAAAA GAAGCTTTTA AAGCAAGAAA ATCACAAATT TTTTATGCAG TTAAAGCAAA TTCAAATTTA AGTGTTTTAA AACTTTTAGT TTCTTTAGAT AGTGGATTTG ATTGTGTTAG TGCGGGTGAG ATTTATAGAG CTTTAAAAGC AGGTGCTAAA AATTATAAAA TTATTTTTAG TGGGGTAGGT AAAAGTGCTG ATGAGTTAAA ATATGCTCTA GAGCAAAATA TACTTTATGT AAATTTAGAA AGTTATGAAG AAATGCTTCT TTTGGAACAA ATTGCTAAAG AAAGTCAAAA GATAGCTCGT ATAAGCATAA GAGTAAATCC AAATGTAGAT GCAAAAACCC ATCCTTACAT ATCTACAGGG CTTCATGAAA ATAAATTTGG TGTAGATATA GAAAGTGCTA AAAAAATGTA TATTTATGCT AAAAATTCAC AATTTTTAGA TCCAGTTAGC GTGCATTTTC ACATAGGCTC ACAAATTCTT GATATAAGTA GTATTCATGA AGCTTCTGTA ATTGTTGCAA AATTAGTAAA AGAGCTTTTG GTTTTAAAAA TTAATATTAA GTTCTTTGAT ATAGGTGGTG GCTTAGGGGT TTGTTATAAA GATGAGCAAG AACCAAATTT ATATGATTAT GCTCAAGGAA TTTTAGCAAG CTTGCAAGGA CTTGATGTAT GTATAGGCAT GGAACCTGGT AGATTTTTAG TGGCAAATGC AGGGGAGTTT ATTACTAAAG TTTTATATGA AAAATTTAAT GATAAAAAGC GTTTTGTGAT TGTTGATGGG GCGATGAATG ATTTATTGCG TCCAAGCTTA TATAGTGCTT ATCATGAAGT CAAGCTTTTG AGTGAAAATA AAGAAGAAAG CCTTTGTGAT ATTGTTGGTG GGGTTTGTGA AAGTGGTGAT TTTTTAGCTA AAGATAGAAA ACTAGCTAAG ACAAAAGCAG GAGATTTGAT CATAGTTAAA AGCGCAGGTG CATATGGCTT TAGCATGAGT AGTAATTATA ATACTCGCAA TAGAGTATGT GAGCTAGCTT GTGAAAATGG CATGGTAAGA ATGATTAGAA AAAGAGAAAG TTATGAGGAT CAAATTGCTT TAGAGCTTGA TTTTTTAAAG GATTAA
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Protein sequence | MDYLKLAKQY NTPFYIYDFD KIKERFLLLK EAFKARKSQI FYAVKANSNL SVLKLLVSLD SGFDCVSAGE IYRALKAGAK NYKIIFSGVG KSADELKYAL EQNILYVNLE SYEEMLLLEQ IAKESQKIAR ISIRVNPNVD AKTHPYISTG LHENKFGVDI ESAKKMYIYA KNSQFLDPVS VHFHIGSQIL DISSIHEASV IVAKLVKELL VLKINIKFFD IGGGLGVCYK DEQEPNLYDY AQGILASLQG LDVCIGMEPG RFLVANAGEF ITKVLYEKFN DKKRFVIVDG AMNDLLRPSL YSAYHEVKLL SENKEESLCD IVGGVCESGD FLAKDRKLAK TKAGDLIIVK SAGAYGFSMS SNYNTRNRVC ELACENGMVR MIRKRESYED QIALELDFLK D
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