Gene Cla_1331 details

Gene Information

• Locus tag: Cla_1331
• ID: 7409837
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1278941
• End bp: 1280977
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 643718453
• Product: MCP-domain signal transduction protein
• Protein accession: YP_002575898
• Protein GI: 222824324
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTA AAAATAGTTT TATTAGTGTA AAGAATAAGC TTTCTTATAC TACAGGGATT 
ATAGTTGCTT TAGCTTTGTT TATAGTAGCG GCAATGGCTT TTTATTCAAG TAGAGAAAAT 
CTTATTATAA ATAGTAAAAA TGCAAATAAA GATTATTTGT TAGTAACTAC TGCTCAAGTG 
GAAACTTATA TTGAAAGTTA TGTTGAAATT CTACTATCTA TAAAAAAATA TATAGATTCA 
TTACCAAAAT ACCAGACAGA AAATTTTGAT AAATTAGGGG AATATTTTGC TAAGGATTTG 
AAAGTATTTA AAGATGGTTC AAATACTTTA GCAGTATATC TTGGTTTTCC TGATGGAACC 
ATGCTTGTTA GTGATGCAGA ATCAGATAAA AAAGGAATAC CTTTTAGAAA AAGAGGTGGT 
GGTATAAGTC ATTATGATGA TCCTCAATAT AATGCAACCA CACGAGATTG GTACAAGGGG 
GCATTAAAAA ATAAAGGTGT TTTTGTAAGT GATGTATATG AAGATTCAGT AACGAAATTT 
CCTAGTTTTA CTTATTCTGT ACCTATTGAA AAAAATGGAA AACTTGTAGC TGTTTTGGGT 
ATTGATTTAC TTTTAACATC ATTGCAAAAA ACATTTGAAA AATTACCAGG AAGTGTATTT 
GTTTTTGACA ATACTAGTTC AATACCTTTT GCATCTAACG ATAAGTCTTT AATATTAAAA 
TCATACCCAA ACATCGACGA GATTAAAAAT CATCATAAAA TAGTAGGTGA TTATAAGACT 
TTTGAATATA CTGGGGTAGA TAGTGGAGAA AAAAGATTTG GAGTTTGTGC AAATATTAAT 
AATTCAAATG CGCATGTTAG CTATGTAGCG TGTGCAATTC AAAAGCAAGA TGATTTAGAT 
AGATTAGTTA TTGAAGATGT ATTTGATCAA ATTATAACAT CTATTGTGAT TTTGATTTTA 
TCATGTTTTA TTGTTTATTT TATTTCATCA AGATTATTAT CACCTTTACA AGTTATCCAA 
ACAGGCCTTA ACTCATTCTT TGATTTTATC AACCATAAAA CCAAAGACTC AGCTATGATT 
AATGTTAATA CAAATGATGA ATTTGGTGCT ATGGCAAAAG CTATCAATGA AAACATCACT 
AAAACTAAAA ATGCTTTAGA ACAAGATGCT AAAGCAGTAG AACAATCAGT TGAAACAGCT 
AAAGAAATAG AACATGGTAA TTTAACAGCA AGAATAACAG CTATTCCTGC TAATCCTCAA 
TTAATAGAAT TAAAAAATGT ATTAAATAAT ATGCTTAGTG TATTAGAAGA AAAAGTTGGT 
TCTAATATGA ATGAAATCAA CCGTGTATTT GATAGCTATA AAGCATTAGA CTTTACAACA 
GAAGTTGCTA ATGCTAAAGG TGAGGTTGAA ATTACTACTA ATGTATTAGG TCAAGAAATA 
GTAAATATGC TAAGACAATC TTCTGAATTT GCTAATTTAC TTGCAACACA AAGTGGTAAA 
TTACAAAGTG CTGTTAGAGA ATTAACAGAT TCTTCATCAA GCCAAGCTTC TTCTTTAGAA 
GAAACAGCTG CTGCTTTAGA AGAAATAACA TCTTCTATGC AAAATGTTTC ATCTAAAACA 
AGTGAAGTAA TAGCTCAAAG TGAAGAAATT AAAAATGTTA CTTCTATAAT AGGAGATATA 
GCTGATCAAA TTAATCTACT TGCATTAAAT GCTGCTATAG AAGCTGCACG TGCTGGAGAA 
CATGGACGTG GCTTTGCTGT TGTTGCTGAT GAAGTTAGAA ATTTAGCTGA GAGAACTCAA 
AAGTCTTTAG GTGAAATAGA AGCTAATACT AATATCTTAG TTCAATCTAT TAATGAAATG 
GGTGAGAGTA TTAAAGAACA AACTACAGGT ATTACTCAAA TAAATGATGC TGTAGCACAA 
ATTGATCATG TAACACAAGA AAATCTTAAA ATAGCTAAAG ATAGTGCTGC AATATCTGAA 
AATGTAAATC AAATAGCTAA TGATATATTA GAAGATGCTA AGAAGAAGAG GTTTTAG 

 

Protein sequence

MFFKNSFISV KNKLSYTTGI IVALALFIVA AMAFYSSREN LIINSKNANK DYLLVTTAQV 
ETYIESYVEI LLSIKKYIDS LPKYQTENFD KLGEYFAKDL KVFKDGSNTL AVYLGFPDGT 
MLVSDAESDK KGIPFRKRGG GISHYDDPQY NATTRDWYKG ALKNKGVFVS DVYEDSVTKF 
PSFTYSVPIE KNGKLVAVLG IDLLLTSLQK TFEKLPGSVF VFDNTSSIPF ASNDKSLILK 
SYPNIDEIKN HHKIVGDYKT FEYTGVDSGE KRFGVCANIN NSNAHVSYVA CAIQKQDDLD 
RLVIEDVFDQ IITSIVILIL SCFIVYFISS RLLSPLQVIQ TGLNSFFDFI NHKTKDSAMI 
NVNTNDEFGA MAKAINENIT KTKNALEQDA KAVEQSVETA KEIEHGNLTA RITAIPANPQ 
LIELKNVLNN MLSVLEEKVG SNMNEINRVF DSYKALDFTT EVANAKGEVE ITTNVLGQEI 
VNMLRQSSEF ANLLATQSGK LQSAVRELTD SSSSQASSLE ETAAALEEIT SSMQNVSSKT 
SEVIAQSEEI KNVTSIIGDI ADQINLLALN AAIEAARAGE HGRGFAVVAD EVRNLAERTQ 
KSLGEIEANT NILVQSINEM GESIKEQTTG ITQINDAVAQ IDHVTQENLK IAKDSAAISE 
NVNQIANDIL EDAKKKRF