| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1328 |
|---|
| Symbol | pseA |
|---|
| ID | 7409834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1275777 |
|---|
| End bp | 1276913 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 643718450 |
|---|
| Product | pseudaminic acid biosynthesis protein PseA |
|---|
| Protein accession | YP_002575895 |
|---|
| Protein GI | 222824321 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR03573] N-acetyl sugar amidotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0537104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT GTAAAAAATG TGTAATGCCA GATACTAAGC CTGATTTGTA TTTTGATGAA
AATGGTATTT GTGATGCCTG TAATTCACAA ATTGATAAAG ATAAAAATAT AAATTGGCAA
GAGCGTGAGA AAGAATTTTT AGAACTTATA AAAAAATACA AAAGCCATCC AATTTATGAT
TGTGTTATAG GTGTAAGTGG TGGTAAAGAT TCTACCTATC AAGTTGTAAA ATGTTTAGAA
CTTGGACTTA ATCCACTTTG TGTTTGCTTT GAGCCAAGTA TTCCTACAAA AATAGGTAAA
AAAAATTTAC AAAATTTAAA TAATTTAGGC GTTGATCTTA TACATATTAA GAGAAATCCA
ATAATTTACA AAAAATTAGC TCGCGAAGCA TTTATAAGAA CAGGGGACAA TGAATGGCAA
AATCATTTGG GAATTTTCAC ATCTGTTCCA AGAATTGCAG TAAATTTTAA TATACCATTA
ATCATATGGG GAGAAAGCCC TCAAATAGAA TATGGCGGCC CTGCTAGCTC TAAAAATGAA
AATGTCTTAG GAAGAAAATG GCTTGAGGAA TTTGGCGGGC TTTTGGGTAA TAGAATTTCT
GATATGATTG GTGTTGATGG AATTAGCGAA AAAGATTTGT ATTTTTATAC TTATCCAAGC
GATGAAGAAT TAAAAAGAGT TGGTGTGACA GGATTGTTTT TGGGATATTA TTTTAAATGG
GATTATAAAA ATAATCTTAA AATTTCAAAA GAAAATGGTT TTAAAACAAG TATAAAACCG
GTTGAAACTA CTTATGAAAA TTTTGAAAAT TTAGATTGTT ATTCTAATCA TGTGCATGAT
TATTTAAAAT ATTGCAAATA TGGCTTTGGA AGAGCTACTG ATAATGCGTG TTTGGATATA
AGACTTGGCT ATATTAGTCG TGAAGAGGGT GTGAGGCTTG TAAACAAATA TGATGGAAAG
CCACCTAAAA AGGCTATTAA GAAATATTTA GAATTTAGTG GTTTTAGTGA AAAAGAATTT
GAAAAAATAG TAGATTCTTT TACAAACAAA AAAATTTTCA GACGCGATGA AAATGGTAAA
TTTTTAAAAG ATAGTGATGG ATCTTTGATA AAAAATAAAG AGTATATTTT AAAATGA
|
|---|
| Protein sequence | MKFCKKCVMP DTKPDLYFDE NGICDACNSQ IDKDKNINWQ EREKEFLELI KKYKSHPIYD
CVIGVSGGKD STYQVVKCLE LGLNPLCVCF EPSIPTKIGK KNLQNLNNLG VDLIHIKRNP
IIYKKLAREA FIRTGDNEWQ NHLGIFTSVP RIAVNFNIPL IIWGESPQIE YGGPASSKNE
NVLGRKWLEE FGGLLGNRIS DMIGVDGISE KDLYFYTYPS DEELKRVGVT GLFLGYYFKW
DYKNNLKISK ENGFKTSIKP VETTYENFEN LDCYSNHVHD YLKYCKYGFG RATDNACLDI
RLGYISREEG VRLVNKYDGK PPKKAIKKYL EFSGFSEKEF EKIVDSFTNK KIFRRDENGK
FLKDSDGSLI KNKEYILK
|
|---|
| |