Gene Cla_1327 details

Gene Information

• Locus tag: Cla_1327
• Symbol: hisH
• ID: 7409833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1275178
• End bp: 1275780
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 643718449
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_002575894
• Protein GI: 222824320
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.011117
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTGTA TAATTGATTA TGATTTAGGA AATTTAAGAT CTATTCAAAA AGCTTTTGAA 
GCTATAAATC AAAAAGTAAT TATAAGCAAA AAAGAACAAG ATATAAAAAA TGCTTCAAAA 
TTGCTTTTGC CAGGAGTTGG ATCTTTTAAA AAAGGCATGG AAAATCTAAA AAATTTACAT 
TTAGATGAAC TCTTAAAAGA AGAAATAATC ATCAAAAAAA AGCCAATTTT AGGAATTTGT 
TTAGGTATGC AACTTTTTTG TAAATTGGGT TTTGAAGGTG GAGAGTGCGA AGGACTTGGC 
TTTGTAGATG CGCAAGTTTT GCAATTTGAT TTAAAAAATG AAAAAAAACT TCATAGCGGA 
TGGGATAATA TTTATTATAA AAATGCAAGT GAAATTTTTA AAAATATAAA AGAAAATAGT 
GATTTTTATT TTGTGCATTC TTATTATGTA AAATGCAATG AAAATGCTCA AACTTCTATG 
TGTGATTATG AAATTTCATT TTGTTCTTCT TTTGAAAAAG AAAATATATA TGCTGTGCAA 
TTTCATCCTG AAAAAAGCCA AAGTGTTGGT TTGAAATTAT TAGAAAATTT CGCAAAATTA 
TAA 

 

Protein sequence

MICIIDYDLG NLRSIQKAFE AINQKVIISK KEQDIKNASK LLLPGVGSFK KGMENLKNLH 
LDELLKEEII IKKKPILGIC LGMQLFCKLG FEGGECEGLG FVDAQVLQFD LKNEKKLHSG 
WDNIYYKNAS EIFKNIKENS DFYFVHSYYV KCNENAQTSM CDYEISFCSS FEKENIYAVQ 
FHPEKSQSVG LKLLENFAKL