Gene Cla_1324 details

Gene Information

• Locus tag: Cla_1324
• ID: 7409830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1273337
• End bp: 1274008
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 643718446
• Product: LmbE-like protein
• Protein accession: YP_002575891
• Protein GI: 222824317
• COG category: [S] Function unknown
• COG ID: [COG2120] Uncharacterized proteins, LmbE homologs

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.0060113
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATA AAATTTTAAT CATAGCAGCT CATCCAGATG ATGAAGTTTT AGGATGTTTT 
GGAACCATAG CAAGATTAAT CAAAGAAGGA TATGAGGCAT ATTCTTTAAT ACTTGGTGAG 
GGAAAAACAA GTAGAGATGA TATAATTGAT ATAAATAAAG AAAAAAATAT TTTAGAAAAT 
GAATTGTTAA AAGCTAACGA AAGCATAGGA ATAAAAAAAG TTTTTAGAGG ATATTTTCCA 
GATAATAGTT TTGATAAAGT TCATTTGCTT GAAATAATTA AAACCATCGA AAATGTTAAA 
AATGAAATAA AACCAAATAT AATTTTTACT CATTATGAAA ATGATTTAAA TATAGATCAT 
CAACTAACTT ATCAAGCAAC GATAACAGCC ACTAGATCTT TGGTAGATGA AAGTGTTAAA 
GAAATTTATA GTTTTGAAAT TCTTTCTAGC ACAGAATGGA AATATCCATT AAGTTTTAAT 
CCTGATGTTT TTTATGATAT AAGCTCAACT TTAGATTTAA AATTAAAAGC CATGTCTTAT 
TATGATTCTG AGCTTAAAGC TTTTCCACAT CCAAGAAGTT TAGAAGGTAT AGAACTTAAT 
GCAAAATACA ACGGAATGCG AGTTGGGTTA AAATACGCTG AAGTTTTTAA ATGTGTGAAA 
ATTATTAAAT GA 

 

Protein sequence

MNNKILIIAA HPDDEVLGCF GTIARLIKEG YEAYSLILGE GKTSRDDIID INKEKNILEN 
ELLKANESIG IKKVFRGYFP DNSFDKVHLL EIIKTIENVK NEIKPNIIFT HYENDLNIDH 
QLTYQATITA TRSLVDESVK EIYSFEILSS TEWKYPLSFN PDVFYDISST LDLKLKAMSY 
YDSELKAFPH PRSLEGIELN AKYNGMRVGL KYAEVFKCVK IIK