Gene Cla_1322 details

Gene Information

• Locus tag: Cla_1322
• Symbol: pseH
• ID: 7409828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1272173
• End bp: 1272664
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 21%
• IMG OID: 643718444
• Product: N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc
• Protein accession: YP_002575889
• Protein GI: 222824315
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins
• TIGRFAM ID: [TIGR03585] pseudaminic acid biosynthesis N-acetyl transferase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0000251242
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAA ATTTTATTGA TTTGAATGAA TTTGAAAAAG AATTTGTTTT AAAATATAGA 
AATGATAAAA ATATCAATAA ATTTATGAAA AATAAAAATA TCACCCATGA AGAGCATTTA 
AATTTTATAC AAAATTTAAA AAATGATTGT ACTAAAAGAT ATTTTTTAGT TTATAAAAGT 
GATCAAGCAA TAGGTGTGAT TGATTTTATA AATATCACTA TAAACTCATG TGAATTTGGA 
CTTTATGGTA TAAAAAAGGG AGTTGGGAAT TCATTGATGG AAGAAATTAA AAATTATGCT 
TTTAATGTTT TAAAAATTCA AAATTTAAAT GCTTGTGTAT TTAAAGAAAA TATTAAAGCT 
TTAAATTTGT ATTTAAAGCA CGGATTTAAT ATCATAAATG AAAATGATGA GTTTTATTTT 
GTAAATTTAA ATAATTATTA TTGGGGGGGG GTAGCAACCA ATAATAGTAT TTTTTATAAG 
GTTGCAATAT GA 

 

Protein sequence

MLKNFIDLNE FEKEFVLKYR NDKNINKFMK NKNITHEEHL NFIQNLKNDC TKRYFLVYKS 
DQAIGVIDFI NITINSCEFG LYGIKKGVGN SLMEEIKNYA FNVLKIQNLN ACVFKENIKA 
LNLYLKHGFN IINENDEFYF VNLNNYYWGG VATNNSIFYK VAI