| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1320 |
|---|
| Symbol | pseF |
|---|
| ID | 7409826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1270664 |
|---|
| End bp | 1271359 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 643718442 |
|---|
| Product | CMP-N-acetylneuraminic acid synthetase |
|---|
| Protein accession | YP_002575887 |
|---|
| Protein GI | 222824313 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
|---|
| TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000000000296134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC TTTGTATTAT CCCAGCGCGT GGTGGTTCTA AGCGTATTCC TAGAAAAAAT
ATTGTTGATT TTTTAGGGAA ACCTTTGATT GCTTATAGTA TTGAAAGCGC TTTAAAGAGT
GAAATTTTTG ATGATGTGAT TATCTCAAGT GATGATGATG AGATTATTGA AGTGGCTTTA
AAATATGGCG CTAAGGCTCC TTTTGTGCGT AAAAAAGAAT TAAGTGATGA TTATGCAAAC
TCAACTGCTG TAATCCAAGA TGCTATTATC ATGCTAGAAA AACAAGATAA ATTTTATGAA
AATGTATGCT GTTTATACGC TACTGCACCG CTTATAGATG AGTTTATCTT AAAAAAAGCT
TTTGAACAAT TTAACCAAGA AAATTGTAAA TTTTTATTTT CGGCATGTGA GTTTGAATAC
CCTATACAAA GAGCTTTTTA TCTAAATGAA AAATATCAAG TTCATATGTT TGAAGAAAAA
TATTATGCTA GTAGAAGTCA AGATTTAATC AAAGCTTATC ATGATGGAGG CGCGTTTTAT
TTTGGTAAAA AAGAAGCTTG GCTAGAAGAA AATTTTATGT TTAAACCATA TTCTAAAGCT
TTTTTACTTC CTAGAAATAA AATTTGTGAT ATTGATACCT TTGATGATTT AGAATTTGCT
AAAATACTTT ATCAATTCAA CAAAGGTAAA ATTTGA
|
|---|
| Protein sequence | MKNLCIIPAR GGSKRIPRKN IVDFLGKPLI AYSIESALKS EIFDDVIISS DDDEIIEVAL
KYGAKAPFVR KKELSDDYAN STAVIQDAII MLEKQDKFYE NVCCLYATAP LIDEFILKKA
FEQFNQENCK FLFSACEFEY PIQRAFYLNE KYQVHMFEEK YYASRSQDLI KAYHDGGAFY
FGKKEAWLEE NFMFKPYSKA FLLPRNKICD IDTFDDLEFA KILYQFNKGK I
|
|---|
| |