Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1254 |
Symbol | pglA |
ID | 7410987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1209756 |
End bp | 1210883 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643718379 |
Product | GalNAc alpha-1,3-transferase |
Protein accession | YP_002575825 |
Protein GI | 222824251 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG GAATTTTAAC CCATAGTGCA ATGAGTGTGT ATTATTTTCG TCTTGCACTC ATTAGGGCTT TAGAAAAAAA TAATCATGAA GTTATTATCA TCACTCCAAA AGATGATTTT GCCATTAAAC TACAAGAGTT AGGATATAAG GTTTGCTTTT ATGATTTAGC CAGATCAAGC GTTAGCCCTT TAGTCGTTTT TAAAAATCTT CTTAGTTTAA AAAATACGCT CAAAAGTTTA AATTTAGACC TTTTACAAGC TAGCGCACAT AAGAGTAATA CAACAGGCAT CATAGCAGCT AAAATGGCGG GCATTAAATA TACTTTTGGT TTGGTTGAGG GTTTGGGAAG TTTTTATATA GATGATGATT TTAAAAGTAA ATTAGTAAGA ATGAGTATAA ATTTACTTTA TAAAATCTCT TTTAAACTTG CTAATGGCTT TATTTTTGTC AACGAAAGCA ATGCTTTATT TATGAAAAAT TTAGGCTTAA AAGAAGAAAA AATTAAAATC ATTAAATCAG TTGGAGTAAA TTTAAAACAA TTTTTACCTT TAAAAATTAG CACAGAGGTA AGACAAGCTT TTTTAAATGA GTTTAATATG CCTAACAAAC CCATAATTTT AATGGTATCA AGAGCCTTAT GGCATAAAGG TATTAAAGAA TTTTACGAAG CTGCTTTAAT CTTAAAAGAT AAGGCCAATT TTGTTTTAGT TGGTGGAGCT GATGATAATA AATCATGTGC TTCACTTGAG TATTTAAATT CAGGTGATGT TTTTTATTTG GGCGCTAGAA AAGATATAGC AAGATTGTTA AATTTATGCG ATATTTTTGT CTTGCCAAGC TATAAAGAAG GCTATCCAAG AACGATTTTA GAAGCACAAG CTTGTAAAAA AGCTTGTGTG GTAAGTGATG CTGAGGGTTG CATTGAAGCA GTGGATAATG CCATAGATGG TTTAATTTGT AAAAGCAAAG ATAGTAAGGA TTTAGCCGAA AAAATTGCTA TTTTATTAGA AGATGAAAAA TTTAAAAACA CTTTAGCACA AAATGCTTTT CTTAGGGCGC AAAATTATGA TGAGGATATC ATAGCTTTGA AATATCTTGA CTTTTATAGG GGTTTTGTGA ATGTATAA
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Protein sequence | MKIGILTHSA MSVYYFRLAL IRALEKNNHE VIIITPKDDF AIKLQELGYK VCFYDLARSS VSPLVVFKNL LSLKNTLKSL NLDLLQASAH KSNTTGIIAA KMAGIKYTFG LVEGLGSFYI DDDFKSKLVR MSINLLYKIS FKLANGFIFV NESNALFMKN LGLKEEKIKI IKSVGVNLKQ FLPLKISTEV RQAFLNEFNM PNKPIILMVS RALWHKGIKE FYEAALILKD KANFVLVGGA DDNKSCASLE YLNSGDVFYL GARKDIARLL NLCDIFVLPS YKEGYPRTIL EAQACKKACV VSDAEGCIEA VDNAIDGLIC KSKDSKDLAE KIAILLEDEK FKNTLAQNAF LRAQNYDEDI IALKYLDFYR GFVNV
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