| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1253 |
|---|
| Symbol | pglB |
|---|
| ID | 7410986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1207621 |
|---|
| End bp | 1209759 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 643718378 |
|---|
| Product | oligosaccharide transferase to N-glycosylate proteins |
|---|
| Protein accession | YP_002575824 |
|---|
| Protein GI | 222824250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC AACAAAATTT CACGGATAAT AATTCTATAA AATATACCTG TATTTTAATC
CTTATAGCCT TTGCTTTTAG TGTTTTGTGT AGATTATACT GGGTAGCTTG GGCAAGTGAG
TTTTATGAGT TTTTCTTTAA TGATCAACTC ATGATTACTA CTAATGATGG CTATGCTTTT
GCAGAAGGTG CAAGAGATAT GATAGCAGGT TTTCATCAAC CTAATGACTT ATCTTATTTT
GGAAGCTCAC TTTCTACTTT GACTTATTGG CTTTATAGTA TTTTGCCTTT TAGCTTTGAA
AGTATTATTT TATATATGAG TGCTTTTTTT GCTTCTTTGA TTGTTGTGCC TATTATATTA
ATCGCAAGAG AGTATAAACT CACTACCTAT GGCTTTATAG CAGCTTTACT TGGAAGCATT
GCAAATAGTT ATTATAACCG CACTATGAGT GGGTATTACG ATACAGATAT GCTAGTGTTA
GTTTTACCAA TGCTTATTTT GCTTACCTTT ATACGCTTAA CTATTAATAA AGACATTTTC
ACCCTACTTT TAAGTCCGGT TTTTATCATG ATTTATTTGT GGTGGTATCC ATCAAGTTAT
TCTTTAAATT TTGCTATGAT AGGACTTTTT GGACTTTATA CTTTAGTATT TCATAGAAAA
GAAAAGATTT TTTATCTAAC TATTGCTTTG ATGATCATAG CTTTAAGTAT GCTAGCATGG
CAATATAAGC TTGCTTTGAT TGTATTATTA TTTGCTATTT TTGCTTTTAA AGAAGAAAAA
ATCAATTTTT ATATGATTTG GGCTTTGATT TTTATTAGCA TTTTGATATT GCATTTAAGT
GGCGGCTTAG ATCCTGTTTT ATACCAACTT AAATTTTATG TATTTAAAGC TTCTGATGTG
CAAAATTTAA AAGATGCTGC CTTTATGTAT TTTAATGTCA ATGAAACCAT TATGGAAGTA
AATACTATCG ATCCTGAAGT ATTTATGCAA AGAATTAGCT CTAGTGTTTT AGTATTTATC
CTTTCTTTTA TAGGTTTTAT CTTACTTTGC AAAGATCACA AAAGCATGCT TTTGGCTCTA
CCTATGCTTG CACTAGGTTT TATGGCTTTA AGAGCTGGAC TTAGATTTAC CATTTATGCA
GTTCCTGTGA TGGCTTTGGG TTTTGGGTAT TTTTTATATG CATTTTTTAA TTTTTTAGAA
AAAAAACAAA TCAAACTTAG CCTAAGAAAT AAAAATATCT TACTTATACT CATTGCATTT
TTTAGTATAA GCCCTGCTTT GATGCATATT TATTATTATA AATCCTCTAC TGTTTTTACT
TCTTATGAAG CTAGTATTTT AAATGATTTA AAAAATAAAG CTCAAAGAGA AGATTATGTT
GTTGCTTGGT GGGATTATGG TTATCCAATA CGCTATTATA GCGATGTAAA AACCTTAATC
GATGGTGGAA AACACCTAGG AAAAGATAAT TTTTTCTCAT CTTTTGTCTT AAGCAAAGAA
CAAATTCCAG CAGCCAATAT GGCAAGACTT AGCGTAGAAT ACACTGAAAA ATCTTTCAAA
GAAAACTATC CTGATGTTTT AAAAGCTATG GTTAAAGATT ATAATAAAAC AAGTGCTAAA
GATTTTTTAG AAAGTTTAAA TGATAAAGAT TTTAAATTTG ATACCAATAA AACTAGAGAT
GTATACATTT ATATGCCTTA TAGAATGTTG CGTATCATGC CTGTGGTGGC ACAATTTGCA
AATACAAATC CTGATAATGG AGAGCAAGAA AAAAGTTTAT TTTTCTCCCA AGCTAATGCC
ATAGCTCAAG ATAAAACCAC AGGTTCTGTT ATGCTTGATA ATGGAGTAGA AATTATTAAT
GATTTTAGAG CCTTAAAAGT AGAAGGTGCA AGCATACCTT TAAAAGCTTT TGTGGATATA
GAATCCATTA CTAATGGCAA ATTTTATTAC AATGAAATTG ATTCAAAAGC TCAAATTTAT
TTGCTCTTTT TAAGAGAATA TAAAAGCTTT GTGATTTTAG ATGAAAGTCT TTATAATAGT
TCTTATATAC AAATGTTTTT GTTAAATCAA TACGATCAAG ATTTATTTGA ACAAATTACT
AATGATACAA GAGCAAAAAT TTATAGGCTA AAAAGATGA
|
|---|
| Protein sequence | MKLQQNFTDN NSIKYTCILI LIAFAFSVLC RLYWVAWASE FYEFFFNDQL MITTNDGYAF
AEGARDMIAG FHQPNDLSYF GSSLSTLTYW LYSILPFSFE SIILYMSAFF ASLIVVPIIL
IAREYKLTTY GFIAALLGSI ANSYYNRTMS GYYDTDMLVL VLPMLILLTF IRLTINKDIF
TLLLSPVFIM IYLWWYPSSY SLNFAMIGLF GLYTLVFHRK EKIFYLTIAL MIIALSMLAW
QYKLALIVLL FAIFAFKEEK INFYMIWALI FISILILHLS GGLDPVLYQL KFYVFKASDV
QNLKDAAFMY FNVNETIMEV NTIDPEVFMQ RISSSVLVFI LSFIGFILLC KDHKSMLLAL
PMLALGFMAL RAGLRFTIYA VPVMALGFGY FLYAFFNFLE KKQIKLSLRN KNILLILIAF
FSISPALMHI YYYKSSTVFT SYEASILNDL KNKAQREDYV VAWWDYGYPI RYYSDVKTLI
DGGKHLGKDN FFSSFVLSKE QIPAANMARL SVEYTEKSFK ENYPDVLKAM VKDYNKTSAK
DFLESLNDKD FKFDTNKTRD VYIYMPYRML RIMPVVAQFA NTNPDNGEQE KSLFFSQANA
IAQDKTTGSV MLDNGVEIIN DFRALKVEGA SIPLKAFVDI ESITNGKFYY NEIDSKAQIY
LLFLREYKSF VILDESLYNS SYIQMFLLNQ YDQDLFEQIT NDTRAKIYRL KR
|
|---|
| |