| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1247 |
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| Symbol | waaC |
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| ID | 7410980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1200859 |
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| End bp | 1201878 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643718372 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_002575818 |
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| Protein GI | 222824244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.313368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG GTTTGGTTAA ATTATCCGCA CTTGGAGATA TCATCCATGC GGCAATTGTT
TTACAATTTA TTAAAAAGCA TTATCCTAAG GCGAGTATTG ATTGGTTTGT AGATGCAAGA
TTTGCAGGAT TATTGCAAGA TCATCCAATG ATCAATGAAG TATATGACCT GCCTTTAAAA
GATAGAAAAT TCAAAGAAAT TTTTGCTACG CTTTTTGAAG CTAGGCAAAA TAAATATGAT
GTTGTGATTG ATTTGCAAGG TTTGATTAAA TCTGCTTTGG TAAGTAAATT TTTATGTGCT
AATACTTTTG GTTTTGATCA AGAAAGCATT AAAGAGAGCT TTGCGAGCAA TTTTTATACG
CATAAATTTG CGTGCAATTA TGAAGAAAAT ATTATCGTGC GTAATCTTTC TTTGGTAGCT
TATGTGTTAA ATGAGCATTT TGATCATAGC GATATAGAGT TAAAACAAAG TTGTTTTAGC
GTAGATGATG AGTTAAAAGA AAGCTTAGAA CAAAGACTTT CTTTAAGTGA AAGTGCGCCA
AATATACTCA TACATGTAGG TTCATCTATG CCTAATAAAA TTTACCCAAA AGAGCGTTTG
ATACTACTTT GTAGAATGCT TTTAGAGTAT TTTACTAGTG CAAAAATCAT GCTTGGTTGG
GGTAATGTTA ATGAGTTTAA TTTTGCTAAA GATATAGTTT TAAATTTAAA ACATTTAAAA
ATAGAACTTG CGCCAAAATT AAGCTTAAGT GAGCTTTGTG CTTTAACTAA GGCAAGTGAT
TTGATTATCG GAAATGATAG CGGGCCTACT CATTTGGCCT TTGCACTAAA CAAGCCTTCT
ATAACGATTT TTGGTGCTAC TCCTAGTCAA AGAAATACCT ATGAAACAAA TATCAACAAA
ACAATCAATG CAGGTAAAAA AATCCTGCAT TCAAAGCATA TAGATAAGAG TGATTTTTGC
ATACAAAATA TCGATGAAAA AGATATTTTT AAACTTGCTT GTGAGCTTTT AGAAAAATGA
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| Protein sequence | MKIGLVKLSA LGDIIHAAIV LQFIKKHYPK ASIDWFVDAR FAGLLQDHPM INEVYDLPLK
DRKFKEIFAT LFEARQNKYD VVIDLQGLIK SALVSKFLCA NTFGFDQESI KESFASNFYT
HKFACNYEEN IIVRNLSLVA YVLNEHFDHS DIELKQSCFS VDDELKESLE QRLSLSESAP
NILIHVGSSM PNKIYPKERL ILLCRMLLEY FTSAKIMLGW GNVNEFNFAK DIVLNLKHLK
IELAPKLSLS ELCALTKASD LIIGNDSGPT HLAFALNKPS ITIFGATPSQ RNTYETNINK
TINAGKKILH SKHIDKSDFC IQNIDEKDIF KLACELLEK
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