Gene Cla_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1242 
Symbol 
ID7410975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1195049 
End bp1196218 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content24% 
IMG OID643718367 
Productglycosyltransferase 
Protein accessionYP_002575813 
Protein GI222824239 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000038464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG TAGGCGTAGT AATTCCTATA TACAATGTAG AGAAATATCT AAAAGAATGT 
TTAGATAGTG TAATCAATCA AACTTATACT AACTTAGAAA TCATACTCGT AAATGATGGT
AGCACAGATG AAAACTCACT TAATATTGCA AAAGAATATA CTCTAAAAGA TAAAAGAATC
ACTCTTTTTG ATAAGAAAAA TGGTGGACAA AGTACAGCTA GAAATATAGG TATAGAATAT
TTTAGTGGAG AATATAAACT CAAAAACAAA ACTCAAACTA TAAAAGAAAA TTCTTTAATA
GAATTTAATA TAGAAGGTAA TAATCCTTAT GAAATATATA CTGTATATAA AAGCTATAAA
GCTTTTAATA ATGAACAAGA TTTAACTAAC CTTACTTATC CTATTATAGA TTATATTATC
TTTTTAGATT CTGATGATTA TTGGGAATTA AACTGCATAG AAGAATGTGT ACCTAGAATG
GATGGGGTTG ATGTGTTGTG GTTTGATAGT ATCGAATATC ATGATATGGA AAAAAGTTAT
CTTAGACATC AAAGTCGTTT AAAAGATACA GGCATAAATG AGGAATGTAA AATAAATCCT
ATAGAGTGGC TTGAATACTT AATACGAAGA AAAATTAAAG ACTTTGCATT TGCGTGGAGT
GGTATGATTG ATTTTGATTA CATAAATGAT AAAAAATTAA AATTTAAAGA TGGTATTTTT
GCCGAAGATC ATTTATTTGG AATTTTACTT TTTTCGCAAG CTAAAAATAT TTACGTCTAT
CCTAAAATAT TTTATTATTA TAGAATTCGA GCTAATTCTT TGACAAATCA AGATAAAAAA
ATTACTAAAG ATAATATTCT TCCATATTTT AAAGATATAT TTATTGCATT TGAAGAGAAT
GCAACTTTAA CAAAAGAGTA TTTTAAATGC GCTAGTTGGG TGCAAACTAG TTTAAAATTA
GTGCAATTTA TAGAAAATTA TCATGATAAA AAAATTTCAT TATTGTTAAA GGATGGTATT
TTATACTTTT ATATCAAAAA TGCATTTAAA GTTGAAAAAT TTGATAAAGA TCCTTTGTGT
ATTAAAGAGA AATTACAACT ATTAAAACCT TATAAAATTT CTAAAATTAA ATACAAAATA
TTATCGTTTT ATAGATATTT TAGAATTTAG
 
Protein sequence
MKTVGVVIPI YNVEKYLKEC LDSVINQTYT NLEIILVNDG STDENSLNIA KEYTLKDKRI 
TLFDKKNGGQ STARNIGIEY FSGEYKLKNK TQTIKENSLI EFNIEGNNPY EIYTVYKSYK
AFNNEQDLTN LTYPIIDYII FLDSDDYWEL NCIEECVPRM DGVDVLWFDS IEYHDMEKSY
LRHQSRLKDT GINEECKINP IEWLEYLIRR KIKDFAFAWS GMIDFDYIND KKLKFKDGIF
AEDHLFGILL FSQAKNIYVY PKIFYYYRIR ANSLTNQDKK ITKDNILPYF KDIFIAFEEN
ATLTKEYFKC ASWVQTSLKL VQFIENYHDK KISLLLKDGI LYFYIKNAFK VEKFDKDPLC
IKEKLQLLKP YKISKIKYKI LSFYRYFRI