| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1235 |
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| Symbol | ptmC |
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| ID | 7410968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1188777 |
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| End bp | 1189781 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718361 |
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| Product | flagellin modification protein PtmC, putative N-acetylneuraminic acid synthetase |
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| Protein accession | YP_002575807 |
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| Protein GI | 222824233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2089] Sialic acid synthase |
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| TIGRFAM ID | [TIGR03569] N-acetylneuraminate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000000147783 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAAA CCATAATCAT AGCTGAAGCT GGAGTTAATC ATAATGGTGA TATAAATTTA
GCTAAAAAAC TTATAGAAAT TGCTAGTGAT GCTGGGGCTG ATTATGTGAA ATTTCAAACC
TTTATAGCTA GTAATTGCGT TAGTAAAATA GCTAAAAAAG CAAAATATCA ATTGCAAAAT
ACTCTTGTAG ATGAAAATCA ACTTGATATG ATTAAAAAAT TAGAACTTTC TAAGCAAGAT
CATGAAATTT TAATCAATCA TTGTAAAAAA CATTCTATTA AATTTCTTTC CACTGCTTTT
GACTTAGAAA GTATAGAATT TTTATCAAGT TTAAATTTGG ATTTTTTTAA AATTCCAAGT
GGAGAAATAA CTAATTTTCC TTATCTTAAA AAAATTGCTT CTTATGATAA AAAAATTATT
CTCTCAACTG GAATGGCCAC TTTAGGCGAG ATTGAAAAAG CTTTAGATAT TTTGGTGCAA
AATGGTACTC AAAGAGATAA AATCATCATT TTACATTGTA ATACAGAATA CCCAACACCT
TTTGAAGATG TGAATTTAAA AGCTATGCAA ACTTTAAAAG AAGCTTTTAA TTTACCTATA
GGATATTCTG ATCATACTTT AGGTATAAAT ATACCTATAG CAGCTGTGGC TATGGGAGCT
TGTGTGATAG AAAAGCATTT TACTTTAGAT AAAAATATGC AAGGACCTGA TCATAAAGCT
TCTTTAGAAC CTGAAGAATT AAAAGCTATG GTTAAATCTA TAAGAGAGCT AGAACAAGCT
TTTGGAGATG GTATTAAAAT TCCAAGCAAA AGCGAAAGTA AAAATAAAAT CATTGCTAGA
AAATCTTTAA TAGCCAAAAA AAATATAAAA AAAGGTGAAA AATTTAATGA AGAAAACCTT
ACCACAAAGC GTCCAGGTAA TGGAATTTGT GCGATGAAAT ATGAAGAGTA TTTAGGTAAA
ATTGCTAAAA AAGATTATAT GGAAGATGAG CTTATAGATG AGTAA
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| Protein sequence | MQKTIIIAEA GVNHNGDINL AKKLIEIASD AGADYVKFQT FIASNCVSKI AKKAKYQLQN
TLVDENQLDM IKKLELSKQD HEILINHCKK HSIKFLSTAF DLESIEFLSS LNLDFFKIPS
GEITNFPYLK KIASYDKKII LSTGMATLGE IEKALDILVQ NGTQRDKIII LHCNTEYPTP
FEDVNLKAMQ TLKEAFNLPI GYSDHTLGIN IPIAAVAMGA CVIEKHFTLD KNMQGPDHKA
SLEPEELKAM VKSIRELEQA FGDGIKIPSK SESKNKIIAR KSLIAKKNIK KGEKFNEENL
TTKRPGNGIC AMKYEEYLGK IAKKDYMEDE LIDE
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