| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1229 |
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| Symbol | ptmB |
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| ID | 7410393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1183406 |
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| End bp | 1184113 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718355 |
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| Product | flagellin modification protein PtmB, acylneuraminate cytidylyltransferase |
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| Protein accession | YP_002575801 |
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| Protein GI | 222824227 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000000281683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAA TTTTATGCAC TATATGTGCA AGAGGTGGCA GTAAGGGTGT AAAAAATAAA
AATATCAGAA AAATTAATAA TTTAGAATTA ATAGCATATA GTATAATCCA AGCTAAAAAT
TCAAACCTTT TTGAACATAT AGTAATTAGC ACAGATAGTG ATGAAATAGC ACAAGTTGCT
TTAAAATATG GCGGAGAAGT TTTTTTTAAA AGAGATGAAA ATTTAGCAAA AGATACGAGT
GCAAAATTAC CTGTGATAAA AGATGCTTTG CTAAAAAGCG AAGAGTATTT TAATACCAAA
TTTGACACCA TAATAGATCT TGATGCTTCT GCACCTTTGC GAAATAGTAA AGATATTTAC
AAAGCATATG AACTTTTTAA ACAAGAAAAA AAATCAAATT TAATCACAGC CACTCCAGCA
AGACGCAACC CATATTTTAA TCTAATAGAA ATAGATAATG ATGAGGTAAA AAAATCAAAA
GATGGAAATT TTACTACGCG CCAAAGTGCT CCAAAATGCT ATGATATGAA TGCTAGCATT
TATATTTTTA CTAGGGAAAA ATTGTTAAAA AATGATACTT TATTTGGAAA AGATACGAGT
TTGTATATAA TGGATGAAAA AACAGCTTTT GATATAGATA GCGAGTTTGA TTTTGAAATA
GTAGAATTTT TAATAAAAAA AGCCAATTTA AAGCAAGAGG ATTTTTAA
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| Protein sequence | MDKILCTICA RGGSKGVKNK NIRKINNLEL IAYSIIQAKN SNLFEHIVIS TDSDEIAQVA
LKYGGEVFFK RDENLAKDTS AKLPVIKDAL LKSEEYFNTK FDTIIDLDAS APLRNSKDIY
KAYELFKQEK KSNLITATPA RRNPYFNLIE IDNDEVKKSK DGNFTTRQSA PKCYDMNASI
YIFTREKLLK NDTLFGKDTS LYIMDEKTAF DIDSEFDFEI VEFLIKKANL KQEDF
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