Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1221 |
Symbol | |
ID | 7410385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1176211 |
End bp | 1177554 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643718347 |
Product | Mg/Co/Ni transporter, MgtE family |
Protein accession | YP_002575793 |
Protein GI | 222824219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00221531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAATG ATTTTTTAGA AGCACAAGAA CTTTTAAAAA ATATTTCCAA AGATCAAAGC ACCTATGAAA CCAATGAAGC CCTAAAGACT ATCAAAAGAT ACAATGAAGA GCTTTATTTG CAAACTCTTA AATCTTTTGA TACTTACACA CTTGCAAATA TAGCTACTAT AACACCCGAA CATATCTTAG AAGATATTTT AGAACACTTA AGCATTATAA AGATTGCAAA AGCAGTAGAA GAGCTTGAAA GTGATGATGC AACAGACTTA ATTAAGCGTT TTGAAGAACT AAACCCACAA AAAACTTTAG CTATTTTAAA CCGCTTAAGT TCCGAAGATA AGGAAGAAAT TTTACGCCTT AAAAATTATG ATGAAAATAC TGCTGGTGCT TATATGCAAA CAGAAATTTT CACAGCTTCT ATTGATGAGA GTATAGAAAA GGCTATAAAA AGATATAGAA TTTTAAAACA CTCAGGACAA GTAGATCAAA TTTTTCAAGT TTATATCATA GATAACCAAG GAAAGCTTTG CAATGCTATC AACCTAAGCG ATCTTTTGCT TTGGGATTTT AAACTAAGTT TTGCAGATAT TATTAAAAAT AATAGCGAAA AGTATAAAAG CTATAGCATA AAAGATTATG AAGATATACA AAAGGCTATT GATATAGTAG AAGATTATGA TTTAAGTGTT TTGGCTGTTA TAAATGATGA TGGAGTGCTT TTGGGTAGAA TTACTTATGA TGATATCCAT GATTTAATCC AAGAAAATGC AACAGAACAA ATTTATAACT TAGCCGGAGT TGATGCAGAT GTTGAAGAAG AAAGTGCTTT TAAAGCAGCT AAAGCTAGAG CTTTTTGGCT TATGATTAAT CTTACGACTT CATTAATCTC AGCTAATATC ATTAGTCTTT TTTCAGGTGA AATAGAAAAA CTTGTAGCTT TAGCGATTTT AATGCCTATA GTAGCTTCTA TGGGAGGAAA TACTGGCTCA CAAGCTTTAG CAGTAACAGT TAGAAAACTC TCACTCAATG AAGTAGAATT CAAAGATGCA AAAAAAGTTA TATTAAGAGA GAGTGGTATA TCTTTACTAA ATGGCTTTAT TTTTGCAATT ATTATGAGTA TAATAGCTTT TATATGGTTT AAAACAGCTC TTTTAGGACT TGTTATAGCC TTATCAATGC TAATTAATCT AGCCTTAGCT GGCTTTGTAG GTTCTTTTGT GCCATTAACA TTAAAAAAAT TTAAAATCGA TCCTGCGGTA GGATCAAGCG TAGTGATCAC TGCAATTACT GATGGTTTGG GATTTTTTAG CTTTTTACTT TTAGCAAAAA TGATTTTATT ATAA
|
Protein sequence | MMNDFLEAQE LLKNISKDQS TYETNEALKT IKRYNEELYL QTLKSFDTYT LANIATITPE HILEDILEHL SIIKIAKAVE ELESDDATDL IKRFEELNPQ KTLAILNRLS SEDKEEILRL KNYDENTAGA YMQTEIFTAS IDESIEKAIK RYRILKHSGQ VDQIFQVYII DNQGKLCNAI NLSDLLLWDF KLSFADIIKN NSEKYKSYSI KDYEDIQKAI DIVEDYDLSV LAVINDDGVL LGRITYDDIH DLIQENATEQ IYNLAGVDAD VEEESAFKAA KARAFWLMIN LTTSLISANI ISLFSGEIEK LVALAILMPI VASMGGNTGS QALAVTVRKL SLNEVEFKDA KKVILRESGI SLLNGFIFAI IMSIIAFIWF KTALLGLVIA LSMLINLALA GFVGSFVPLT LKKFKIDPAV GSSVVITAIT DGLGFFSFLL LAKMILL
|
| |