| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1160 |
|---|
| Symbol | gatA |
|---|
| ID | 7410324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1108603 |
|---|
| End bp | 1109967 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643718286 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_002575733 |
|---|
| Protein GI | 222824159 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACTT TAGAAGAAGC TTTGAAATTT TCAAAAGAAG AGATAATAAA TTTAAAAAAA
GAATTAAATC AAAAAGCAAA AGAGCAAAAA CATCTTGGTG CTTATGTTGA GCAATTTTTA
GATAAAGATC TAAGTGAAAG TGGCGATGGA GTGCCTGTTG CTATAAAAGA TAATATTAGT
GTAAAAGATT GGGAATTAAC TTGTGCTTCT AAGATTTTGC AAGGTTATGT AGCTCCATAT
GATGCAAGCG TTATAACCAA TTTACGCAAA AACAACCTTT CTCCTTTTGG AAGATGTAAT
ATGGATGAAT TTGCCATGGG AAGCACTAGT GCGACTTCAT TTTATGGTAA AACCTTAAAT
CCACATGATA ACACAAAAGT TCCAGGTGGA AGTAGCGGGG GAAGTGCAGC AGCTGTTGCT
AGTGGTTTGG CGATTGCAAG TTTGGGTTCT GATACTGGTG GTTCAGTTAG ACAACCTGCT
GCTTTTTGTG GATGTGTTGG GTTTAAGCCA AGTTATGGAA GAGTTAGTAG ATATGGTTTG
GCTGCATATT CTTCAAGCCT TGATCAAATA GGGGTTTTAA CGCAAAATGT TAAAGACGCG
GCTATTTTAT ATGATGTTAT AGCTGGATAT GATGAAAAAG ATAGCACAAG TGCAAACATA
GCTTTTGAGC CAACTGCGCC AAAACTAAAT GCAAATAAAA AGCTAAAAAT AGCTGTAATT
AAAAATTATA TAGATCAGAC TAATGATGAT GTAAAACAAG CTTTATTAAA AACCATAGAT
ATGTTAAAAG CAAATGGGTA TGAGATTGTT TATAAAGATT TGATGGATTC TACATTTGAT
GTTGCAGCTT ATTATATCAT AGCAGCAGCT GAAGCAAGCG CAAATTTAAG CCGTTATGAT
GGTGTAAGAT ATGGTAGAAG AAGCGAAAAA TGTGACAATC TTAGCCAAAT GTATATAAAT
AGCAGAAGTG AAGGTTTTGG AGAAGAAGTA AAAAGAAGAA TTTTATTAGG AACCTTTGTT
TTAAGTAGTG GCTATTATGA TGCATATTAC ATTAAAGCAC AAAAGGCTAG AAGATTTATT
AAACAAAAAT ATGAAGAGAT TTTAAATGAT TGTGATTTGA TTTTTATGCC AGTTGCTCCA
AGTGTTGCTT TTGGCTTTAA TGATGTTAAA ACTCCTATTC AAATGTATTT AGAAGATGTA
TTTACTATTT CAGTGAATTT AGCAGGACTT GGCGGTATTA GCGTGCCAGT AGGAAAAAAT
GAAAATGGGC TTAATATTTC TGCTCAGCTT ATATGTAAAG CTTATGATGA GCAAACTTTA
TTAGATGGTG CTTTGAGCTT GGAAGAAATT ATCAAAAACA AATAA
|
|---|
| Protein sequence | MVTLEEALKF SKEEIINLKK ELNQKAKEQK HLGAYVEQFL DKDLSESGDG VPVAIKDNIS
VKDWELTCAS KILQGYVAPY DASVITNLRK NNLSPFGRCN MDEFAMGSTS ATSFYGKTLN
PHDNTKVPGG SSGGSAAAVA SGLAIASLGS DTGGSVRQPA AFCGCVGFKP SYGRVSRYGL
AAYSSSLDQI GVLTQNVKDA AILYDVIAGY DEKDSTSANI AFEPTAPKLN ANKKLKIAVI
KNYIDQTNDD VKQALLKTID MLKANGYEIV YKDLMDSTFD VAAYYIIAAA EASANLSRYD
GVRYGRRSEK CDNLSQMYIN SRSEGFGEEV KRRILLGTFV LSSGYYDAYY IKAQKARRFI
KQKYEEILND CDLIFMPVAP SVAFGFNDVK TPIQMYLEDV FTISVNLAGL GGISVPVGKN
ENGLNISAQL ICKAYDEQTL LDGALSLEEI IKNK
|
|---|
| |