Gene Cla_1147 details

Gene Information

• Locus tag: Cla_1147
• Symbol: thiH
• ID: 7410881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1096142
• End bp: 1097275
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643718273
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_002575720
• Protein GI: 222824146
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0000413421
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAT ATCCTCATAT GCAAAGCATT GAAAGTGAAA TTTTAACTAA GGCTTTAAAA 
GAAGTTGAAG AATTTGATGA AAGTAAATTT AGCGCTTTTG ATGTAAAGCA AGCTTTAGTT 
AAAGATTATC TTAACTTAGA TGATTTAAAA GCCTTGCTTT CAAGTGCAGC AGAAGATTTC 
ATAGAAGATT TGGCACAAAA ATCAAGCTAT GTTACTCGAA GACACTTTGG AAATTCCATC 
TCTCTTTTTA CGCCTTTATA TCTTTCTAAT TTTTGCAATA GTAAATGTAC TTATTGTGGA 
TTTCAAAAAG GAAATAATAT TAAAAGAGCT AAGCTAAATG AGGCCGAAAT TCACAAAGAA 
ATGCAAGAGA TTAAAAAAAG TGGTTTAGAA GAAATTTTGC TTCTAACAGG CGAAGGTAGG 
GAGTATGCTA GCGTAGAATA CCTTGCTAAA GCTTGTGAGA TAGCAAAAGA GTATTTTAAA 
GTTGTGGGGA TTGAAGTTTA TCCTATGAAT ATAGATGAGT ATGCATTGCT TCATGAAAAG 
GGTTGTGAGT ATGTAAGTGT TTATCAAGAA ACTTATAATC AAAAAACTTA TTCTAAAATT 
CATATCGAAG GTGAAAAAAG TGTATTTGAG TATCGCTTTT ATGCACAAGA AAGGGCTTTG 
AAAGCAGGTA TGAGAGGAGT GGCTTTTGGA GCTTTACTTG GCGTGGATGA TTTTAGGAAA 
GATGCTTTTG CTACGGCTTT ACATGCGTAT TTTTTACAGC AAAAATACCC TCATGCTGAA 
ATAGCTTTAT CTATCCCTAG GCTAAGACCT ATTATCAATA ATAAAAAAAT TCATCCAAAA 
GATGTAAGTG AAACAAGACT TTTGCAAGTT TTGTGTGCTT ATAGATTGTT TTTACCTTTT 
GCAAGTATTA CGATTTCTAC GCGTGAAAGA GCAGGATTTA GAGACGGAGT TATTAAACTA 
GGAGCTACTA AAATGAGTGC TGGAGTGAGT GTGGGAGTGG GTGAGCATCA AGGTGATAAA 
AAAGGTGATG ATCAGTTTCA AATTAGTGAT ATGCGTAGTG TTGATGAGGT TTTGGCTATG 
TTGAAAAATG CAAATTTACA AGCTGTAATG AGCGATAGTA TTTATGTGGG GTAA 

 

Protein sequence

MQKYPHMQSI ESEILTKALK EVEEFDESKF SAFDVKQALV KDYLNLDDLK ALLSSAAEDF 
IEDLAQKSSY VTRRHFGNSI SLFTPLYLSN FCNSKCTYCG FQKGNNIKRA KLNEAEIHKE 
MQEIKKSGLE EILLLTGEGR EYASVEYLAK ACEIAKEYFK VVGIEVYPMN IDEYALLHEK 
GCEYVSVYQE TYNQKTYSKI HIEGEKSVFE YRFYAQERAL KAGMRGVAFG ALLGVDDFRK 
DAFATALHAY FLQQKYPHAE IALSIPRLRP IINNKKIHPK DVSETRLLQV LCAYRLFLPF 
ASITISTRER AGFRDGVIKL GATKMSAGVS VGVGEHQGDK KGDDQFQISD MRSVDEVLAM 
LKNANLQAVM SDSIYVG