Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1131 |
Symbol | hemN |
ID | 7410865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1081437 |
End bp | 1082792 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643718257 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_002575704 |
Protein GI | 222824130 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT ATAAAAGCTT TGTCAAATAC TCCAAAGCAG GCCCAAGATA TACATCTTAT CCTACTGCAG TGGAATTTAA CACTCAGTTT AAATATGAAG ATTATATACA AATTTTAAAA GATCAAAAAG CACAACTATC TTTGTATTTT CATTTGCCTT TTTGTAGGAG TGCTTGCTAT TTTTGTGGTT GTAATGTGAT ATATACTGCT AAAGAAGAAA GCAAAGAAAG ATATTTAAGC TATCTTTTTA AAGAACTTGA ACTTTTAGCA AATATCATCA ACACCCAAAG AGAAGTAGCT CAAATGCATT TTGGTGGTGG AACCCCTACT TTCTTTTCCG CCAAGCAATT GCAAAAATTA ATCTTAAAAA TAAAAAACAT TTTTCCAAAT TTTACTCAAG ATAGTGAAAT AAGCTGTGAG ATTGATCCTA GATTTTTAAA CGAAGAGCAA GCTGATGTTT TAATTAGCAA TGGTTTTAAT CGTATTAGTT TTGGGGTGCA AGATTTTGAT GAAAAAGTTC AAAAAGAAAT TCATAGAATT CAACCCTTTG AATTAACCAA AAATGCAGTA GATATGGTAA GAAAAAAAGG CATAAAGTCT GTAAATATGG ACTTAATTTA TGGTCTTCCT TATCAAAGCC TAGAAAGTTT TAAACAAACT TTAGAAAAAG CATTATTGAT TAATCCTGAT CGCTTTGCTA TATTTAATTA CGCTCATGTG CCTTGGCTTA AAAAAAATAT GAGAAAATTT GATGAAAGTA CATTACCAAG CCCTGATGTA AAACTTCAGA TTCTAGAATA TTGTGAAATT TTCTTAACTC AAAATGGGTA TAAAATGATA GGAATGGATC ATTTTGCAAA ACCCCAAGAT GAGCTTTTTA AAGCTTTAGA AAATGGTAGT TTACATAGAA ATTTTCAAGG CTATACTACT AAAGGTGGGA CTGATTTAAT AGGCATTGGC TTAACAAGCA TAGGTGAAGG GCAAAGACAT TATATGCAAA ATTTCAAAGA CATGCCAAGC TATGAAAAAG CCATTGATGA GGGTAGATTA CCTTGTGAAA AAGGCATTAT GCTTGATGAT GATGATGAAT TAAGAAAAGC TGTCATTATG GAACTTATGA GTAATTTTGC ACTTAATATA AAAAATATAG AAAATAAATT TAAGATTGAC TTTTTTGAAT ATTTTAAACA AGATTTAAAA GAACTTGAAG AACTTAGCGA ATTTGTCGCT ATAGATGAAA ATTATATCAA AGTTAATGAA ACAGGAGTGC TTTTAATACG CAATATTGCT ATGTGTTTTG ATAAATATTT AAAACGCATT AGCGAAGATA AAAAAGTATT TTCTAAAACG GTTTAA
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Protein sequence | MKDYKSFVKY SKAGPRYTSY PTAVEFNTQF KYEDYIQILK DQKAQLSLYF HLPFCRSACY FCGCNVIYTA KEESKERYLS YLFKELELLA NIINTQREVA QMHFGGGTPT FFSAKQLQKL ILKIKNIFPN FTQDSEISCE IDPRFLNEEQ ADVLISNGFN RISFGVQDFD EKVQKEIHRI QPFELTKNAV DMVRKKGIKS VNMDLIYGLP YQSLESFKQT LEKALLINPD RFAIFNYAHV PWLKKNMRKF DESTLPSPDV KLQILEYCEI FLTQNGYKMI GMDHFAKPQD ELFKALENGS LHRNFQGYTT KGGTDLIGIG LTSIGEGQRH YMQNFKDMPS YEKAIDEGRL PCEKGIMLDD DDELRKAVIM ELMSNFALNI KNIENKFKID FFEYFKQDLK ELEELSEFVA IDENYIKVNE TGVLLIRNIA MCFDKYLKRI SEDKKVFSKT V
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