Gene Cla_1122 details

Gene Information

• Locus tag: Cla_1122
• Symbol: thiE
• ID: 7410856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1075343
• End bp: 1075969
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643718248
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_002575695
• Protein GI: 222824121
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAT TTAAAATTTA TCTTGTTGCA AGCAAGGGTG AAAAAAGCGA AAGTGAGTTT 
TTAAATATCT TAGAGGCTTC ATTAAAAGCA AAAATTGATA TTTTGCAACT TAGAGAAAAA 
AATCTTAGCA CCTTAGAATT TTACAAGCTT GCACTAAAGG TTAAAACTTT GTGCGAAAAA 
TACAACACTG CATTTGTGAT AAATGATAGA ATTGATATAG CCATGGCTGT TAATGCAGAT 
GGAGTGCATA TTGGCCAAAA AGATATGCCT TTAAAAAAAG CAAGAGAGCT TTTGGGTGAG 
GATAAAATCA TAGGACTTAC AATCAATCAT AAAAGCGAAC TTGCTAACAT TCAAGATGCT 
ACTTATCTTG GAGTAGGGGC TGTTTTTGCA ACGCCTAGTA AGCAAGATTG TGCTATTCTT 
GGTATAGATG GTTTAAAAGA AATTTCAAAT TTAAGCACTT TGCCAATTGT GGCTATTGGC 
GGGATAGATG AAACAAATTT AAATTTGCTT AAAGACTGCA ATATCCAAGG TATAGCCGTA 
ATTAGAGCTA TCATGCAAGC AAGTGATCCT TATATGGCAA CTTTAAATTT AAGATCAAAT 
TTTGATAAAA CTTTTATAGG AAAATAA 

 

Protein sequence

MKSFKIYLVA SKGEKSESEF LNILEASLKA KIDILQLREK NLSTLEFYKL ALKVKTLCEK 
YNTAFVINDR IDIAMAVNAD GVHIGQKDMP LKKARELLGE DKIIGLTINH KSELANIQDA 
TYLGVGAVFA TPSKQDCAIL GIDGLKEISN LSTLPIVAIG GIDETNLNLL KDCNIQGIAV 
IRAIMQASDP YMATLNLRSN FDKTFIGK