| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1097 |
|---|
| Symbol | petA |
|---|
| ID | 7410831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1051395 |
|---|
| End bp | 1051898 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643718223 |
|---|
| Product | ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit |
|---|
| Protein accession | YP_002575670 |
|---|
| Protein GI | 222824096 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.616368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAT CTGAAAGTAG ACGAAGCTTT ATGGGCTTTG CCTTTGGAAC AGTAGCTGCT
GTGGGTGGTG CTTTTTCATT AGTTGCAATG AAAAAAACAT GGGATCCACT CCCAAGTGTA
AAAGCAGCAG GTATTACTAC TGTAGATCTA ACTGACATGA AAGAGGGCGA GCTTAGAACA
ATTGAATGGC GTAAGAAGCC TATATTTATC TTAAAAAAAG ATGCAGATAT GGCAAAAGAT
AGCAATAGAG ATGTTGTTGT AGGTGATGTT GCTTATACTG TAGTTATTGG ACTTTGTACA
CATTTAGGCT GTATTCCAGC TTATGCTCCA AGCGAAAAAT TATTTAAGTG TGCTTGTCAT
GGTGGTGAAT TTGACACTAG TGGTAAAAAT GTATTTGGTC CTCCTCCAAG ACCTTTGGAC
ATTCCTCCTT TTAGAATTGA TGGAACAAAA TTAGTATTAG GCGAAGAAGG TCCAGAATAT
AAAAAAATGA TCGCGGAGGC TTAA
|
|---|
| Protein sequence | MATSESRRSF MGFAFGTVAA VGGAFSLVAM KKTWDPLPSV KAAGITTVDL TDMKEGELRT
IEWRKKPIFI LKKDADMAKD SNRDVVVGDV AYTVVIGLCT HLGCIPAYAP SEKLFKCACH
GGEFDTSGKN VFGPPPRPLD IPPFRIDGTK LVLGEEGPEY KKMIAEA
|
|---|
| |