| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1091 |
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| Symbol | fliR |
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| ID | 7410825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1045589 |
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| End bp | 1046359 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718217 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002575664 |
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| Protein GI | 222824090 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTTG TTAATTATTT AGGCGATGAA AATGTTGTAA TTTTCATGCT TTTATTTGCC
AGAATGAGCG GGTTAATAGT ATTTTTCCCT TTTTTTTCTC ACAATAGCAT ACCTTTGGTA
GTAAAAACAA CTTTAGCTTT ATTTTTAACA ATGTTTTTAT ATCCTTTGGC AAAACTTGAA
AATAATACAC CTGACTCTTT TTTTATTTTA TATCTTTTAA GTGAAGTGCT TTTTGGGATG
GTTGCAGGTT TAATTTTGCA AATGATTTTT GCCATTTTAC AAATGGCAGG TGAACAAATT
TCTTTTACCA TGGGTTTTTC TATGGCTAGT ATTTTAGATC CGGCTACAGG TGCCAATACA
CCAGTGATTT CCCAAGTTTT AAATTTACTT GCATTGTTAG TTTTTTTAGC TTTTGATGGA
CATCATTTGA TTTTACTTTT TATATCAAAT TCATTGGAAT ATATTAGTTT AGGTGGATTT
TATCCGCATG AGAATTTAAT GCTTTATTTA AATAAAGCTA TGGTAAATAT TTTTGTGCTT
GGTTTTTCCA TGGCTTTTCC TATTTTAGCA ATATCTTTAT TATCAGATGT TATTTTTGGT
ATGCTTATGA AAACTATGCC ACAATTTAAT CTTTTAGTAG TGGGTTATCC TATTAAGATA
TTTTTGTCTT TTGCAGTACT TATTGCTATT TTACTCATCA TGATGCAGTA TTTTAAAAAT
TTAATGTTAA AAAGTTTTGA GCATATGGAG TTATTGTTTT TCAATATATA A
|
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| Protein sequence | MEFVNYLGDE NVVIFMLLFA RMSGLIVFFP FFSHNSIPLV VKTTLALFLT MFLYPLAKLE
NNTPDSFFIL YLLSEVLFGM VAGLILQMIF AILQMAGEQI SFTMGFSMAS ILDPATGANT
PVISQVLNLL ALLVFLAFDG HHLILLFISN SLEYISLGGF YPHENLMLYL NKAMVNIFVL
GFSMAFPILA ISLLSDVIFG MLMKTMPQFN LLVVGYPIKI FLSFAVLIAI LLIMMQYFKN
LMLKSFEHME LLFFNI
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