Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1085 |
Symbol | |
ID | 7410819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1040402 |
End bp | 1041178 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643718211 |
Product | conserved hypothetical integral membrane protein (DUF1212 domain protein) |
Protein accession | YP_002575658 |
Protein GI | 222824084 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.451526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC CATCAATTCA AAATTTAACG GATTTTTTAA TCGAATACAT TAGTGTTTTT TTAAGCGCTG GAACTTACAC AGCAAGAGTG GCAAAGTGCG TTGGAAGAAT AGCTAATGCA TATGGTTATG AGATTAACAT GAATTTTTTC TTTCATCATA CTACACTAAA TATTTTTGAT AAAGATGATA ATTCCATACA AAGAACCTAT ATCATACCTA ATAAACACAA TCACATTAAC TTTAAACTTA TTTTAGAGCT CAGTGCATTA AGCTGGCAAA TTCATGATCA TAAATACAAC CTAGAAGAAG CTAAATTCTT TCTTTTAAAA CTCAAACAAA GCACAAGAAA TCCTTTTTTA GCGAATTTGT TTTTGGTTTC AGTAGCAAAT TCCGCATTTT GCAAGCTATT TGGAGGAGAT TTTTATGGTT GTTTATTTGT ATTTTTAGCT ACTTTAGTAG GTTTTAGCTT AAGAGTTTTG CTCACTAGAA TAAAAATTGA TTTAAGAATT CAATACATTA TTTGTTCTTT TTTATCTTCA TTTATTGTAT TTTTTGGGGT GGATTTAAAA CTCGTGCAAG AAGCCAATGT TGCTTTGGGT TCTAGTATAT TGTATTTAAT TCCTGGGGTT TATTTTATAA ACTCCGTTAT AGACATTTTA AAAGATCATA TACTTATGGG ACTTAGTCGT ATTATTAGTG TGGCGATATT GGTATGCTGT ATTGCCATTG GAATTTATAC TACTCTTAGT ATCAATGATT TTGGGATTTT AAGATGA
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Protein sequence | MQKPSIQNLT DFLIEYISVF LSAGTYTARV AKCVGRIANA YGYEINMNFF FHHTTLNIFD KDDNSIQRTY IIPNKHNHIN FKLILELSAL SWQIHDHKYN LEEAKFFLLK LKQSTRNPFL ANLFLVSVAN SAFCKLFGGD FYGCLFVFLA TLVGFSLRVL LTRIKIDLRI QYIICSFLSS FIVFFGVDLK LVQEANVALG SSILYLIPGV YFINSVIDIL KDHILMGLSR IISVAILVCC IAIGIYTTLS INDFGILR
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