Gene Cla_1060 details

Gene Information

• Locus tag: Cla_1060
• Symbol: smpB
• ID: 7410794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1015984
• End bp: 1016442
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 643718186
• Product: SsrA-binding protein
• Protein accession: YP_002575633
• Protein GI: 222824059
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA AAACTATAGT AAAAAACAAA AAAGCTTTTT TTGATTATGA AATTTTAGAA 
AAATTTGAAG CAGGCATTGT TTTAAAAGGT TCTGAAGTAG TAGCATTAAG AGCTAGTAGA 
GCAAATTTAA AAGATTCTTT TGTGCGTATT ATTAAAGGCG AAATTTTTTT ACTTAATGCT 
CATATTTCTC ACTTAAGCAC AACACATGCT TTTTATAAGC ACGAAGAAAA AGGTGCGCGA 
AAACTTTTAA TGCATAAAAA GCAAATCGAC AAGCTTTTTG GTAAAATTAG CACCCAAGGC 
TTTACTATAG TGCCATTAGA ACTTTATTTT AATGAAAAAA ACAAAGCAAA AGTTTTAATA 
GCCTTAGCTA AAGGAAAAAA TTTGCATGAT AAAAGAGAAA GCTTAAAGAA AAAACAAGCA 
GATCTTGAAG CAAGAGCTGC TATGAAAAAT CATTATTAA 

 

Protein sequence

MMKKTIVKNK KAFFDYEILE KFEAGIVLKG SEVVALRASR ANLKDSFVRI IKGEIFLLNA 
HISHLSTTHA FYKHEEKGAR KLLMHKKQID KLFGKISTQG FTIVPLELYF NEKNKAKVLI 
ALAKGKNLHD KRESLKKKQA DLEARAAMKN HY