| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1054 |
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| Symbol | pepF |
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| ID | 7410788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 1009979 |
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| End bp | 1011700 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718180 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_002575627 |
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| Protein GI | 222824053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATT GGAACTTAAG TACATTATTT AAAGATGAGC AAGAATTAAA TCTTTTTTTA
CAAAAAACCC AAGATGAAGC TTGTGAATTT AAAAAACAAT ATGAAAATAA TCTTCATAGT
TTAGACAATG AGCAATTCTT GCAAGCTTTA AAAAATTATG AAGAATTAAT CTTAAAACTT
TCTCACATAC TAACCTATGT GTATTTAAAT TTTGCTCAAG ATACCACCAA AGGTGCTTTT
TATGCAAAAT ATGAAAATTT AAGCAAAAAA ATAGAAGAAA ATCTTTTATT TTTTGAGCTT
GAATTTTGTG AGTTAAAAGA AGAAAAAAGT AAAACTTTCA TCACATTTTG CAAAGATTAT
GAGTTTTATT TAAATAATCT TATCAAACAC AAAAAACACA ATCTTTCTAA AAAAGAAGAA
AGAGTTATCC TAGCCCTATC AAGTACAGGT TCAAATGCAT TTGCAAGATT ATTTGATGAA
ACCTTTAGTG CTTTAAAATT TAATTTTGAA GGACAAAAAT TAAGCGAAGA AGAAATTCTA
AGTAAGCTTT ATGATAAAGA TAGAAGTATT AGAAAAAAAG CTTCAAAATG CTTTAGTAAA
ACTTTAAAAA AACAAAACAA ACTTTTAGTA TATATTTTCA ATATGATTAA AAGTGAACTT
GCTAGTATTT GTGAGTTAAG ATCTTATGAA AATCCAGAAA CTCCAAGACA TATAAGAAAT
CAAATTTCTA AAAAAAGTGT TGATGCGCTT ATTAGTGCTA GCGAGAATAG CTTTGATATT
GTTTCTAAAT TTTATAATAC AAAGAAAAAA ATTCTAGGAT ATAAAAAATT AAAAGATTAT
GATCGCTATG CGCCTATTGG TAAAGAAATG CAAGTTGATT TTGATCAAGG AAAGGATATA
GTTTTAAAAG CCTTTGAAAA ATTTTCCAAA GATTTTTATA AGATAGCAAA AGAAGCCTTT
GAGAATAATT GGATCGATGT TTACCCTAAA GAATTTAAAC AAAGTGGTGC TTTTTCTCAC
TCAAGTACAC CACTAAGTCA TCCTTTCATA CTTTTAAACT ATACCAATCA AAGACGCGAT
CTTTTTACTC TAGCACATGA GCTAGGCCAC ACTATACATC AAAAACTTTC TTATAAAGTA
AGTTTTTTAA ATCAAGATAC ACCACTAACT ACAGCAGAAA CTGCTTCAGT GTTTGCTGAA
ATGCTAATTT TTGATTATAT AAAAGAAAAT TTAGACAAAG AAGAGCTTTT ATCTTTGTAT
GCAGCAAAGA TCGAAGATAT TTTTGCTACT CTTTATAGAC AAATTAATTT TACAACTTTT
GAACGCAGAT TTCATGCTAA AAAAGAAGAA CTAAGCGCTC AAGAACTAAG TGAAATTTGG
CTTGAAGAAT CAAGAAAAAT GTTTCAAGAT AGCGTAGTTT TAACTAAAAA CTATGGCCTT
TGGTATTCTT ATATACCACA TTTTATACAC TCTCCATTTT ACTGCTATGC TTATGCTTAT
GCACAACTTT TAGTTTTAGC ACTTTATGGT CTATACAAAA GTGGTAAATG TCCTGATTTT
ACCTCAATTT ATATTGAGTT TTTAAGTAGC GGTGGAAGTA AAAGCCCAAA AGAACTTGTA
GCTATGTTTG GCTTTGATAT AGAAAGTGAT GAGTTTTGGA ATATAGGCTT AGAGCAAGTT
AGAATACTAG TAGATGATTT TTTAAGGCTA AGCAATGATT GA
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| Protein sequence | MQNWNLSTLF KDEQELNLFL QKTQDEACEF KKQYENNLHS LDNEQFLQAL KNYEELILKL
SHILTYVYLN FAQDTTKGAF YAKYENLSKK IEENLLFFEL EFCELKEEKS KTFITFCKDY
EFYLNNLIKH KKHNLSKKEE RVILALSSTG SNAFARLFDE TFSALKFNFE GQKLSEEEIL
SKLYDKDRSI RKKASKCFSK TLKKQNKLLV YIFNMIKSEL ASICELRSYE NPETPRHIRN
QISKKSVDAL ISASENSFDI VSKFYNTKKK ILGYKKLKDY DRYAPIGKEM QVDFDQGKDI
VLKAFEKFSK DFYKIAKEAF ENNWIDVYPK EFKQSGAFSH SSTPLSHPFI LLNYTNQRRD
LFTLAHELGH TIHQKLSYKV SFLNQDTPLT TAETASVFAE MLIFDYIKEN LDKEELLSLY
AAKIEDIFAT LYRQINFTTF ERRFHAKKEE LSAQELSEIW LEESRKMFQD SVVLTKNYGL
WYSYIPHFIH SPFYCYAYAY AQLLVLALYG LYKSGKCPDF TSIYIEFLSS GGSKSPKELV
AMFGFDIESD EFWNIGLEQV RILVDDFLRL SND
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