Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1000 |
Symbol | |
ID | 7410735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 954509 |
End bp | 955228 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 643718127 |
Product | conserved hypothetical protein (DUF164 domain protein) |
Protein accession | YP_002575574 |
Protein GI | 222824000 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAT ATTTAGAACA ACTTATAGCT TTATCACAAA TTGATAAAGA ACTTGATGGT TTTGCAAATA AAGTAGAAGA TGCTACAAAA GATTTAAAAG AAAAACGCAA TTTACTTGAT AAAACAGAAG AAGAAATTGC AGGCTTTGAG AAAGATATTA AAGATATAGA AAATCAAAAA ATTCAAAATA ACAATCATAT TGCAGAATTT GGTGTAAAAA TAAAAGAAAT AGCCAAAAAA AGTGCAGCAG TAAAAACCGA AAAAGAAGCA AATGCTTTAA AAATTGAAGA GGATATAGCC AAAGAACAAC TTGATGCAGC AAATGAAGAA ATTGAAAGAT TGGATAAAAT TTTAGAAAAT AAAGAAAAGT TTATACAAGA ATTGCAAGCT AAAAGAAGTG AACTTGAAAA TGAAGTGGAT CAAATTGACG CTCAAACTAA AAATGTTTTA GTGGATATCG AAAAAGAAAG ATTAGAAATT TATGATAAAA AGGTAAAACT AGTAGGTGAA ATAAATCAAA AAGTTTTAAC TTTTTATGAA AAAATTAGAA AATGGGCGGG AAATACTGCA GTAGTTCCTG TAAAAAAACA TGCTTGTTAT GGCTGTTTTA TGAGAATTTA TGATAAAACT TATTTGGCTG TTTTAAAAGG TGATGAAATC ATAACTTGCC CGCATTGTGG AAGAATTTTG TACAAAGAAA AAGAAGAAAA TCAAAATTGA
|
Protein sequence | MSKYLEQLIA LSQIDKELDG FANKVEDATK DLKEKRNLLD KTEEEIAGFE KDIKDIENQK IQNNNHIAEF GVKIKEIAKK SAAVKTEKEA NALKIEEDIA KEQLDAANEE IERLDKILEN KEKFIQELQA KRSELENEVD QIDAQTKNVL VDIEKERLEI YDKKVKLVGE INQKVLTFYE KIRKWAGNTA VVPVKKHACY GCFMRIYDKT YLAVLKGDEI ITCPHCGRIL YKEKEENQN
|
| |