Gene Cla_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1000 
Symbol 
ID7410735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp954509 
End bp955228 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content27% 
IMG OID643718127 
Productconserved hypothetical protein (DUF164 domain protein) 
Protein accessionYP_002575574 
Protein GI222824000 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT ATTTAGAACA ACTTATAGCT TTATCACAAA TTGATAAAGA ACTTGATGGT 
TTTGCAAATA AAGTAGAAGA TGCTACAAAA GATTTAAAAG AAAAACGCAA TTTACTTGAT
AAAACAGAAG AAGAAATTGC AGGCTTTGAG AAAGATATTA AAGATATAGA AAATCAAAAA
ATTCAAAATA ACAATCATAT TGCAGAATTT GGTGTAAAAA TAAAAGAAAT AGCCAAAAAA
AGTGCAGCAG TAAAAACCGA AAAAGAAGCA AATGCTTTAA AAATTGAAGA GGATATAGCC
AAAGAACAAC TTGATGCAGC AAATGAAGAA ATTGAAAGAT TGGATAAAAT TTTAGAAAAT
AAAGAAAAGT TTATACAAGA ATTGCAAGCT AAAAGAAGTG AACTTGAAAA TGAAGTGGAT
CAAATTGACG CTCAAACTAA AAATGTTTTA GTGGATATCG AAAAAGAAAG ATTAGAAATT
TATGATAAAA AGGTAAAACT AGTAGGTGAA ATAAATCAAA AAGTTTTAAC TTTTTATGAA
AAAATTAGAA AATGGGCGGG AAATACTGCA GTAGTTCCTG TAAAAAAACA TGCTTGTTAT
GGCTGTTTTA TGAGAATTTA TGATAAAACT TATTTGGCTG TTTTAAAAGG TGATGAAATC
ATAACTTGCC CGCATTGTGG AAGAATTTTG TACAAAGAAA AAGAAGAAAA TCAAAATTGA
 
Protein sequence
MSKYLEQLIA LSQIDKELDG FANKVEDATK DLKEKRNLLD KTEEEIAGFE KDIKDIENQK 
IQNNNHIAEF GVKIKEIAKK SAAVKTEKEA NALKIEEDIA KEQLDAANEE IERLDKILEN
KEKFIQELQA KRSELENEVD QIDAQTKNVL VDIEKERLEI YDKKVKLVGE INQKVLTFYE
KIRKWAGNTA VVPVKKHACY GCFMRIYDKT YLAVLKGDEI ITCPHCGRIL YKEKEENQN