| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0967 |
|---|
| Symbol | |
|---|
| ID | 7410547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 923779 |
|---|
| End bp | 924951 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 643718095 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_002575542 |
|---|
| Protein GI | 222823968 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.955052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTAA GTAAAAAATA TAATTTATTT AATGTGAATT TTTTCTGTAT TTTTGGGATA
AATTTTGCTA TTTGTCTTGT TTTTTATATG AGTACTATTT CTAGTACAGA TTATGTTTTA
GGTGTTTTAA ACCTTCAAAC TAGCACCGCA GGTCTTATCA TGGGAGCTTT TGTTATAGGC
GCTTTGCTAT CTAGACTTTA TTTTGGTTCT ATAATCGATG ATGTTAATAT AAAAAAGGTT
ATAGTGTTTT CGCTTTTGTT TTATCTTTTT ATTAATTTAA TGTATTTGAA ATTTTATAAT
GTATATTTTT TGATTTTGAT ACGCTTTTTA GCAGGGATTT GCTATGGAAT TTGTTCTTGT
GCTTGTGGGG CAGCTATTGC TAGAATAATA CCTAGCAATA AAAGAGGAGT TGGTATAGGA
TATTATGCCA CAAGCGTTGT TTTAACTTCA GCTTTAGGTC CTTTTTTGGC CATAAAACTT
GACTCCATCA ATCAATTTTG GCTTAGTTTT TTAATAGCAT GCTTGAGTAT TGTTTTTGCA
TTAATCTTAT CTATTTTTTT AAAAGTAAGA AGATTTAAAA AACATCATCA TACAAAAAGA
AAATTTAGTA TTTATAATTA CTTTGAAAAA TCAGTTTTAA ATTTAGCCTT GGTAACCTTT
TTACTTGCAT GTCCTTTTGG CGCTATTATA GCCTATATGA GTGCTTATAC CCAAAGTTTA
AATTTAGCTT TCGCTGGGTC TATGTTTTTT GTGATATATG CTGGATTTTC TATGATTTTT
AGACCACTTG CTGGTAAAGT GTTTGATAAA TATGGTGCTA ATATTGTGAT GATTTTTTCT
TTTTTGAGTT TTATAGTATG TTTGCTTTTA CTTGCTTTTG CATTAAATTT TTATATGATT
ATTTTAGCTG GAGTTTTTTG TGCGTTAGGT TATGCTAATG CTACTTCAAG TGCTCAAGCT
TTAGCTATAA AACTTGCACC TAAAGAAAAA ATGGGCTTGG CTAATTCTAC CTTTTTTATA
GCCTTAGATT TTGGTATAGG AGTAAGTCCT TATTTGCTAG GAATTATAGA GCCAAGTATA
GGTTTTGCTA ATGTTTATGC CTTTTGTGCT TTATTAGTTG CAATGGCTTT GATTTTGTAT
TGTTTATTGG TTGTAAAAAA AACTTCTTAT TAA
|
|---|
| Protein sequence | MGLSKKYNLF NVNFFCIFGI NFAICLVFYM STISSTDYVL GVLNLQTSTA GLIMGAFVIG
ALLSRLYFGS IIDDVNIKKV IVFSLLFYLF INLMYLKFYN VYFLILIRFL AGICYGICSC
ACGAAIARII PSNKRGVGIG YYATSVVLTS ALGPFLAIKL DSINQFWLSF LIACLSIVFA
LILSIFLKVR RFKKHHHTKR KFSIYNYFEK SVLNLALVTF LLACPFGAII AYMSAYTQSL
NLAFAGSMFF VIYAGFSMIF RPLAGKVFDK YGANIVMIFS FLSFIVCLLL LAFALNFYMI
ILAGVFCALG YANATSSAQA LAIKLAPKEK MGLANSTFFI ALDFGIGVSP YLLGIIEPSI
GFANVYAFCA LLVAMALILY CLLVVKKTSY
|
|---|
| |