Gene Cla_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0941 
SymbolflhA 
ID7410521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp901620 
End bp903779 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content33% 
IMG OID643718069 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_002575516 
Protein GI222823942 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.653874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA GAGATATTTT TAGCTTAGTA TTGCCTTGGG TTGCTCCGCT TGTTGCACCT 
ATTTTAAAGG CAAAAAGTTT AACTATAGTA GCTGTAATTA TTGCAATTTT GGCTATTATT
ATAGTGCCTT TACCAAGTAT AGTTTTAGAC TTTTTTCTTG CTTTAAGTAT TGCAATTTCG
GTTTTAATTA TTTTAATTTC TTTATATATA CCAAAACCTA CAGATTTAAC AACTTTTCCA
ACTATGATTT TAATTATTAC GCTTTTTAGA CTTTCGCTTA ACATTGCTAC AACGCGTATG
ATTTTAAGTG AGGGTCATCA AGGTCCAGCT GCTGTTAGTG ATATAGTGGC AAGTTTTGGT
GAATTTGTTG TTGGTGGTAA TTATGTTATA GGTATGGTTG TTTTTTGTAT TTTGGTTTTG
ATTAATTTTA TGGTTGTAAC CAAAGGTAGT ACAAGGGTTT CTGAGGTTCA AGCTAGATTT
ACTCTTGATG CAATGCCAGG TAAGCAAATG GCTATTGATG CGGATTTAAA CGCAGGTTTG
ATTGATGAAA AAACTGCACG CGCAAGACGC CAAGAAATCA TAGCTGAAGC AAATTTTTAT
GGAGCGATGG ATGGTTCTTC TAAATTTATA AAAGGAGACG CTGTTGCTGG GATTATCATC
ACTATTGTAA ATTTAATTGG TGGTTTTATG ATAGGCTATT TTCAGCATGA TATGGAGCTT
AGCCAGTGCG CTTCAACTTA TACTATATTA ACGATAGGTG ATGGGCTTGT TTCTCAAATT
CCTGGGCTTA TAACTTCAAC AGCAACTGCA ATTATCATCA CGCGTGCTAG CAAAGATGAG
GATAATTTTG CTGAAGGTTC AATTAATCAG CTTTTAGGAG AGTACAAAAC ATTATTAATT
GTAGGCTTTG TTTTGTTTAT TTTTGCTTTA GTCCCTGGTT TGCCACACTT TTCTTTGGGA
TTTATGGCTT TGGTGTTTTT GGGCCTTGGT TATATGATAA AACAAGTGCA AGAAGGCAAA
ATTCAAATCA ATACAATTTC GGCTAAAAAA TCTCAAGAAG CTGATGAACA AGAGCAAGCT
AAACCTCAAA AACGCAGCGA AGAAGAAATT TTAAAAGAAG AAGAAAATAA AATAAGCGAT
ATTTTAAAAC TAGAAATTTT AGAATTAGAA TTAGGTTATG GGCTTATTAA ATTAGCAGAA
AGTGAGCTAA CAGAGCGTAT AAGGTCAACA AGGCGTAATA TAGCTCAAAG CCTTGGTTTT
TTAATGCCAA AAATTAGAAT TAGAGATAAT TTACAATTAA AACCAAATGA ATATACCTTT
AAATTAAAAG GTGTTGGTAT AGCTAGTGCT GAAATTTATC CTGATAAATA CTTGGCTATG
GATAGTGGTT TTATTACTGA GCCTATTGAG GGTATAGCTA CCAAAGAGCC AGCGTTTAAT
TCTGATGCGC TTTGGATAGA TGCTTCTTTA AAAGATGAGG CGACATTAAA TGGTTATATT
GTAATTGATC CAGCAAGTGT GATTTCAACC CATATGAGTG AGCTTATCAA AGCTAATGCT
GCTGAACTTT TAACTAAGCA AGAGGTTCAA AACTTACTAG ATAAAATTAA AAATGATTAT
CCTATCGTGG TAGATGATTG TTTAAGGGTT GCTAGTATAG GTTTGATTCA AAAAGTTTTA
AAAGCTTTAC TTAAAGAACA TATTCCTATT AAAGATATGC TTACGATTTT AGAATCAATT
AGTGATATAG CTGAAGTAAG CAAGAGTTTG GATATGATTA TTGAGCATGT AAGAGCATCT
TTGGCAAGAG CGATTACAAA TTTATATGTG GATGAAAAAG GACAAATTAG CTTTTATATT
TTTGATGCTG CTGCGGCTGC AAAATTAATG GAGCATGTAC AATTTAAAGA TGGTTCGTAT
CATTTGATGA TTAATGTAGC TCAAACTGGA GCCTTGGTTG AAGCTTTAAA AGCTGAACTT
GCAAGTGTAG CAAACACTAG AATTAAACCA TTTTTACTCT GTGTTGAACC ACAACTTAGA
AAATTTATTG CAGATATTTG CTCAAATTTT GGTATTAACA TTACGGTTTT AAGTTTTGCA
GAAATTGCAG AAAATACTAA ATTTGAAACA GAAGGTATTA TAAAAGTTGA CGATTTATAA
 
Protein sequence
MAKRDIFSLV LPWVAPLVAP ILKAKSLTIV AVIIAILAII IVPLPSIVLD FFLALSIAIS 
VLIILISLYI PKPTDLTTFP TMILIITLFR LSLNIATTRM ILSEGHQGPA AVSDIVASFG
EFVVGGNYVI GMVVFCILVL INFMVVTKGS TRVSEVQARF TLDAMPGKQM AIDADLNAGL
IDEKTARARR QEIIAEANFY GAMDGSSKFI KGDAVAGIII TIVNLIGGFM IGYFQHDMEL
SQCASTYTIL TIGDGLVSQI PGLITSTATA IIITRASKDE DNFAEGSINQ LLGEYKTLLI
VGFVLFIFAL VPGLPHFSLG FMALVFLGLG YMIKQVQEGK IQINTISAKK SQEADEQEQA
KPQKRSEEEI LKEEENKISD ILKLEILELE LGYGLIKLAE SELTERIRST RRNIAQSLGF
LMPKIRIRDN LQLKPNEYTF KLKGVGIASA EIYPDKYLAM DSGFITEPIE GIATKEPAFN
SDALWIDASL KDEATLNGYI VIDPASVIST HMSELIKANA AELLTKQEVQ NLLDKIKNDY
PIVVDDCLRV ASIGLIQKVL KALLKEHIPI KDMLTILESI SDIAEVSKSL DMIIEHVRAS
LARAITNLYV DEKGQISFYI FDAAAAAKLM EHVQFKDGSY HLMINVAQTG ALVEALKAEL
ASVANTRIKP FLLCVEPQLR KFIADICSNF GINITVLSFA EIAENTKFET EGIIKVDDL