| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0899 |
|---|
| Symbol | |
|---|
| ID | 7410479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 858102 |
|---|
| End bp | 858701 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643718028 |
|---|
| Product | conserved hypothetical protein, putative hydrolase (metallo-beta-lactamase family) |
|---|
| Protein accession | YP_002575475 |
|---|
| Protein GI | 222823901 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.585968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT TGAAACAACC ATGTGGAATG TATGAAACAA ATTGTTATAT TATAGATCAC
AATAATAAGC AAATTATCAT CGATCCAGGA GAAAATGCTT ATAAGTTTAT CAAAGAAAAT
ACAAGCAAAC CTTTAGCTAT TTTAAATACC CATGGTCATT ATGATCATGT TTATGATAAT
GCTAAAGTTA AAATGGCTTA TGAAATTCCA ATTTTTATCC ATAAAGATGA TGCTTTTATG
CTAAAAGATT CTTTTAATTA TGGTTTTGAG CATTCAAATG CTGATGTGTT AATAGAAAAT
GAAAATGAAT TTAGTATAGA TGAGTTTAAG TTTAAATTTC ATCATTTTCC AGGGCATACT
CCAGGGTGTT GCATGATAGA ACTTGTGGGT GAAGATGTGC TTTTTAGTGG GGATTTTTTA
TTTTATCGTA GTATTGGTAG ATGGGATTTT CCTTACTCAG ATGCAACTAA GATGAAAGAG
AGTTTGCTTA AAGTTTTAGC TTATGAAAAA GATTTTAGAT TACTTCCAGG GCATGGAGAA
GAAAGCACTT TAAATGAAGA GCAAAAAGCA ATTCCTGCTT GGTTAAGGTA TTTTCACTAA
|
|---|
| Protein sequence | MRILKQPCGM YETNCYIIDH NNKQIIIDPG ENAYKFIKEN TSKPLAILNT HGHYDHVYDN
AKVKMAYEIP IFIHKDDAFM LKDSFNYGFE HSNADVLIEN ENEFSIDEFK FKFHHFPGHT
PGCCMIELVG EDVLFSGDFL FYRSIGRWDF PYSDATKMKE SLLKVLAYEK DFRLLPGHGE
ESTLNEEQKA IPAWLRYFH
|
|---|
| |