Gene Cla_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0890 
Symbol 
ID7410470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp849165 
End bp849992 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content33% 
IMG OID643718019 
ProductNAD-dependent protein deacetylase (SIR2 family), putative 
Protein accessionYP_002575466 
Protein GI222823892 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0094897 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAC AAACTCATAT CAAAGAAGCT TTAGACAAAG CAGAGGTAAT CATCATCACA 
GCTGGAGCTG GCATGGGAGT AGATAGTGGT TTGCCTGATT TTAGAGGAAA AGAAGGTTTT
TGGAGAGCTT ATCCGCATTT GCAAAAACTA GGCATAGACT TTGAACGCAT GGCTAATCCT
ACAAATTTTT ATACAAACGC ACAGCTTGCT TGGGCTTTTT ATGGACATAG ATTTAAATTA
TACAAAGATA CTATGCCACA CAAAGGTTAT GAAATACTTT TAAAACTTGC AAAAAGCAAA
CAAGATTATT ATATCGTTAC GACTAATGTA GATGGGCATT TTAAAAAGGC TGGCTTTGAT
GAGAATAAAA TTTATGAATT TCATGGAAAT ATAAATTACT TGCAATGTTT TAATTATGCA
TGCGGTGATT TGATCTGGCA AATGCAAGAG GAATTAGATA TAGATATGGA AAATTTCAAA
GCCTTATCTT TGCCAAAATG TCCTAGATGT CAAGGTTTGG CAAGGCCAAA TATCTTAATG
TTTAATGATG GTAGTTTTAA TGATAGCCGT TATTTTTTAC AAAAGCAAAG TTATAAAAAC
TGGCTTAAAC CCTTAGAGGA TAAAAACATC TTGCTTATAG AGCTTGGAGC TGGTAAGGCT
GTACCTAGTA TGCGTATATT TGGCGAGAAT TTTTGTAAAA AAAGCAAAGC TAGAACACTT
TTAAGGATTA ATCCAAATGA GTGTGATTTT CCAAAGTTTT TTAGAAATGG CATAGGGCTT
AAGATGAAAG CTTTGGAAGC TTTGGAAATG ATAGATAGCT TGATATAA
 
Protein sequence
MQIQTHIKEA LDKAEVIIIT AGAGMGVDSG LPDFRGKEGF WRAYPHLQKL GIDFERMANP 
TNFYTNAQLA WAFYGHRFKL YKDTMPHKGY EILLKLAKSK QDYYIVTTNV DGHFKKAGFD
ENKIYEFHGN INYLQCFNYA CGDLIWQMQE ELDIDMENFK ALSLPKCPRC QGLARPNILM
FNDGSFNDSR YFLQKQSYKN WLKPLEDKNI LLIELGAGKA VPSMRIFGEN FCKKSKARTL
LRINPNECDF PKFFRNGIGL KMKALEALEM IDSLI