Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0890 |
Symbol | |
ID | 7410470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 849165 |
End bp | 849992 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643718019 |
Product | NAD-dependent protein deacetylase (SIR2 family), putative |
Protein accession | YP_002575466 |
Protein GI | 222823892 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0094897 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATAC AAACTCATAT CAAAGAAGCT TTAGACAAAG CAGAGGTAAT CATCATCACA GCTGGAGCTG GCATGGGAGT AGATAGTGGT TTGCCTGATT TTAGAGGAAA AGAAGGTTTT TGGAGAGCTT ATCCGCATTT GCAAAAACTA GGCATAGACT TTGAACGCAT GGCTAATCCT ACAAATTTTT ATACAAACGC ACAGCTTGCT TGGGCTTTTT ATGGACATAG ATTTAAATTA TACAAAGATA CTATGCCACA CAAAGGTTAT GAAATACTTT TAAAACTTGC AAAAAGCAAA CAAGATTATT ATATCGTTAC GACTAATGTA GATGGGCATT TTAAAAAGGC TGGCTTTGAT GAGAATAAAA TTTATGAATT TCATGGAAAT ATAAATTACT TGCAATGTTT TAATTATGCA TGCGGTGATT TGATCTGGCA AATGCAAGAG GAATTAGATA TAGATATGGA AAATTTCAAA GCCTTATCTT TGCCAAAATG TCCTAGATGT CAAGGTTTGG CAAGGCCAAA TATCTTAATG TTTAATGATG GTAGTTTTAA TGATAGCCGT TATTTTTTAC AAAAGCAAAG TTATAAAAAC TGGCTTAAAC CCTTAGAGGA TAAAAACATC TTGCTTATAG AGCTTGGAGC TGGTAAGGCT GTACCTAGTA TGCGTATATT TGGCGAGAAT TTTTGTAAAA AAAGCAAAGC TAGAACACTT TTAAGGATTA ATCCAAATGA GTGTGATTTT CCAAAGTTTT TTAGAAATGG CATAGGGCTT AAGATGAAAG CTTTGGAAGC TTTGGAAATG ATAGATAGCT TGATATAA
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Protein sequence | MQIQTHIKEA LDKAEVIIIT AGAGMGVDSG LPDFRGKEGF WRAYPHLQKL GIDFERMANP TNFYTNAQLA WAFYGHRFKL YKDTMPHKGY EILLKLAKSK QDYYIVTTNV DGHFKKAGFD ENKIYEFHGN INYLQCFNYA CGDLIWQMQE ELDIDMENFK ALSLPKCPRC QGLARPNILM FNDGSFNDSR YFLQKQSYKN WLKPLEDKNI LLIELGAGKA VPSMRIFGEN FCKKSKARTL LRINPNECDF PKFFRNGIGL KMKALEALEM IDSLI
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