Gene Cla_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0888 
Symbol 
ID7410468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp845641 
End bp847770 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content25% 
IMG OID643718017 
Productconserved hypothetical protein (DUF262 domain protein) 
Protein accessionYP_002575464 
Protein GI222823890 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0257798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA ATTTAGTAAA TAATCAAAAT CAAGCAAGTG TTATAAGTAT TGAGAATATT 
GTAAAAAAAC AAAGTATCTT TTTTGAAATT CCACCTTATC AAAGACTATA TGAGTGGGAT
AAAGAGCAAA TACAAACCTT ACTTAATGAT ATAAAAACTA AATTTGATGA AAATAAGAAA
GATGAAAATA AGAATAAAGA ATACTTTATC GGCAATGTAG TGGTAAGTAA AAAATCTGTT
AAAAATGATC AGAAAGTTGA TGTTAAACAC TTACTCATAG ATGGCCAACA ACGCTTAACA
ACTTTGTTTT TGATAGGATT TTATCTTTCT TATAAAAATT GCGATAATTG GCAAAATTTT
ATTATAAACG ATAATAAACT TAGAATTTCC ATGCCTATAA GAGAAAAAGA AGAAGAAGTT
CTAAAAGAAT TTGCTAAATT TTGTGAAGGT GGTGAGAGAA AAAATGATAT TTTTTTACAA
GAAATTAAAA AATTTCCACA AGATATATGC CAAAACATAC CACAAGCTTT AGAAACCATA
GTAAATTGGT TTAAAGAAAA TATCAAAGAA AATACTAATG AATTTTCCGA TGAATTTTCC
GAATTTTCTA AATTTATTTA TAGCAATGTA AAATTTGTTT TTGTAGAATT AGCCGAAAAT
ACTGACTTAA ACCGCTTTTT TATCCGTATG AATAACCGTG GCAAGCAACT AGAAAAACAT
GAAATTTTAA AAGCAAGATT GCTTTCTAAA TTTAATGATG AAGATGAAAG CAAAAGAACT
CTTTATGCTC ATATATGGGA TATTTGCTCT CAAATGGATA ATTATATCTT TCAAAAAGCT
AGCGATAGAA AGATTTCTAG TATAAAAGAA AGTGATGAGA ATGATAATTC TATAGATAAG
ATAATACAAT TTGAAGAATC TTTTAAAAAA CCAAATCAAG ATGAAGAAGA GCAGGAAAAA
TTTAAATCTA TAGTGGATTT TCCTACTTTT TTATTGCATG TTTATAAGCT TACTTTTTTA
GAAGAAAAGC AAAATGAAAA TAATGATAAA AATTTTACCA TAGACAAAAA TAAGCTTTTA
GAGATTATAA AAATAGAAGA AAAAGAAAGC ACCAAAACAT TCATGGAAAA TCTTTTAATA
TATAGAATTT TATTTGATTA TTTTGTTATT AAAGGTCAAG ATGATGAGGA AAATTCTTAT
AAGATTAGAA GATTAACTAA AAATACAAAA AATAACACAT ATTCAATCAG CGAAGATTCT
AATGTTATGC CTGAACTTGC TATGGTGCAA AATTATCTAC GCGTAGCAAG AAGTGGTATG
TCTAATAATC ATCATCACTG GCTTACTCCG TTTTTGAAAT TTTTGGATAA AGAGATTAAT
TTGAACTTTT CATTTGATGG GTTAAATGAT GATGAAAATA TAATCAATAA AATACAAATA
AAAGATAATA TTAATTTTGA TGATTTTATC ACAAAGGATA AAAATTATTT TCAGAAAAAT
ACAATATCTT TCCTTGAAAA TTTAGATACA GCTTTAGCTA AAGAGCAATT GCAAGATAAA
GTTAATGAAA TTTTACAAGA TTCACAAAAG AAAGATGATG AAAATTTTCA AATAGATAAT
TTTTTCAAAA AAGAAAAATG CATATTAGAT CAAGGAACAG CGACTCCGCA TTATTGGTTT
TATCGTTTGG AGTATTATTT ATGGAAGTAT TCAAAAATGG AATATTCTTT AGAAAATAAT
GTAAAATTAA AAGAAATAAA ATTAGATAAT AAAACATTTG ACTATGTTGC TAGCAGTTTC
TATTTTAGAA ATTTAAATTC CATAGAACAT GTGCAAGCAC AAAGTAAAGC ACAAGAATGG
AAAAATGACA AAGATAAAAT AGATAATTTT GGAAATTTAG CTCTTATTAG CTCTAGTTTC
AACTCATCTT TGAATAACCA AGATGTGCCA AGTAAGTATA GAGATTTCCA AAAAAGATAT
GTGGATAATA AAAAAGCAGT TATATCTTTA AAACTTTGGT TAATTTATGC TTTAAGCGAA
AAAGATCAGT CAAAATGGAC TTTTGGTAAT GCACAAACAC ACAAAGAACA AATGTTAGAA
ATATTAAAAA AATCGTTTGA AAGCAGTTAA
 
Protein sequence
MESNLVNNQN QASVISIENI VKKQSIFFEI PPYQRLYEWD KEQIQTLLND IKTKFDENKK 
DENKNKEYFI GNVVVSKKSV KNDQKVDVKH LLIDGQQRLT TLFLIGFYLS YKNCDNWQNF
IINDNKLRIS MPIREKEEEV LKEFAKFCEG GERKNDIFLQ EIKKFPQDIC QNIPQALETI
VNWFKENIKE NTNEFSDEFS EFSKFIYSNV KFVFVELAEN TDLNRFFIRM NNRGKQLEKH
EILKARLLSK FNDEDESKRT LYAHIWDICS QMDNYIFQKA SDRKISSIKE SDENDNSIDK
IIQFEESFKK PNQDEEEQEK FKSIVDFPTF LLHVYKLTFL EEKQNENNDK NFTIDKNKLL
EIIKIEEKES TKTFMENLLI YRILFDYFVI KGQDDEENSY KIRRLTKNTK NNTYSISEDS
NVMPELAMVQ NYLRVARSGM SNNHHHWLTP FLKFLDKEIN LNFSFDGLND DENIINKIQI
KDNINFDDFI TKDKNYFQKN TISFLENLDT ALAKEQLQDK VNEILQDSQK KDDENFQIDN
FFKKEKCILD QGTATPHYWF YRLEYYLWKY SKMEYSLENN VKLKEIKLDN KTFDYVASSF
YFRNLNSIEH VQAQSKAQEW KNDKDKIDNF GNLALISSSF NSSLNNQDVP SKYRDFQKRY
VDNKKAVISL KLWLIYALSE KDQSKWTFGN AQTHKEQMLE ILKKSFESS