Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0885 |
Symbol | |
ID | 7410465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 842150 |
End bp | 843319 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 643718014 |
Product | hypothetical protein |
Protein accession | YP_002575461 |
Protein GI | 222823887 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.000693381 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGATT TAAAAGATTT TCTTGATAAA TTTGCTTCTT TTAAAAAAGA GCGTATGCAA GAAAGAAAAA GATTGGGCAA AAATGACTAC AATCCTTTAT TAAAGGTTTT GCCCGCTCAT GATGAGGTGA ATTTGCATAG TGGAATTTTA AATTCTTTAC TTGATCCTAG TGAGAATCAT GAACAAGGAA AGTTATTTTT AGATTTATTT TTAGAAAAGA TAGGATTAAA AGAATGGTTT GGAGAAAGTG GTGATGTAGA AGTCTTAAAA GAACATGAAA ATATAGATAT TTATATACAT AATGGCACTA AACACATTAT ACTAGAAAAT AAAATTTGGG CGAAAGATCA AAATGAGCAA ATTGCTAGGT ATATAGATAC ATTAAATAAT GGAGAAAAGA AAGATATCGC AGTGATTTAT CTTACTCCAT ATGGCGATAG AGATCCTAGT GAGAATAGTT TAAATGGTTG GAATATAGAA AATGTTGAAA ATGAATTATT CTTAAAAAGA GGCGATGATA AAGTGCTATA TAGACAAATT TCTTATGAGA AAGAAATTTT AACTTGGTTA AAAAAATCTC AAGAAAAGGT TAAAAATTTT TGCAATTTAA ACCAAACTAT AGAATTTTAC AAAGATGCTA TAAATAATGT CATAGGCAAT GGTAGTGATA TAATAAGCTT TTTGCAAAAG GAAAGTAAAG TTGGTTTTGA ACAATTGTTT AAAGATTTAG TTAATAATAA GTCAAAATTA TTGCCAAAAA TATCAATGTA TGAAAGAGAT TATATTATCA ATAAGTTTTT AGAAGAAACT TGCAAAGTTT TTGATAATGA TTTTAGCATT GATAATGGCT CAAGCTATAT TCAATTTATA CTCAAACCAA AGAATTTAAG TAATAATGAT GTATATTTTG CTTTTGCTTG GTTTGATACT ACAAATTCTA AAAATTGGAA AAATTTTGGA ATCAGACTTA TAGGTGATAT ATCACAAGGA GATAGAGAAA AAATTCAAGA GAAAATACCT GAATTTAACG GATACACTTT ATCTGATTAT ATAGTTTTTG ATAAAAATCC TACAGCAGGA GCAATACTAA AATTTATTGA AGAAAATAAA GAAAAAATCA AAGAATTAAA TGAAAAATTA AACGGAGTAA AAAACAATGA AAACTCTTGA
|
Protein sequence | MEDLKDFLDK FASFKKERMQ ERKRLGKNDY NPLLKVLPAH DEVNLHSGIL NSLLDPSENH EQGKLFLDLF LEKIGLKEWF GESGDVEVLK EHENIDIYIH NGTKHIILEN KIWAKDQNEQ IARYIDTLNN GEKKDIAVIY LTPYGDRDPS ENSLNGWNIE NVENELFLKR GDDKVLYRQI SYEKEILTWL KKSQEKVKNF CNLNQTIEFY KDAINNVIGN GSDIISFLQK ESKVGFEQLF KDLVNNKSKL LPKISMYERD YIINKFLEET CKVFDNDFSI DNGSSYIQFI LKPKNLSNND VYFAFAWFDT TNSKNWKNFG IRLIGDISQG DREKIQEKIP EFNGYTLSDY IVFDKNPTAG AILKFIEENK EKIKELNEKL NGVKNNENS
|
| |