| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0824 |
|---|
| Symbol | |
|---|
| ID | 7410404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 789967 |
|---|
| End bp | 791145 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 643717954 |
|---|
| Product | site-specific recombinase, phage integrase family |
|---|
| Protein accession | YP_002575401 |
|---|
| Protein GI | 222823827 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.966036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TTAATAAACT TACAGATAGT TTCTTGAAAA GCGTAAAATG CGATAATGGT
AAAAAATTTA TAAAATTTAG CGATCCTAGT ATAAAAGGAT TATATGTTTT TGTTTATCCT
AGTGGTAGAA AACTATTTAA AACAAGACAA GCTAATGATA CTTATATAAC ACTTGGGGAA
TATCCCTTGC TTTCCCTAGC AGAGCTTAGA GAAATAGCTA TAAATTCGCA CAAACTAAAA
GCCAAGGGTC AAAACATAAG CAATGCAAAA AGATTGAAAT TTGGCGTATT ATATGATGAA
GTATTAGAAA ATGCAAGAAA AAGTAATTTA GCAGCGAAAA CAATCCAAAG AGGACTAAGC
TACAAAGAAG GTATTTTTAA ATCTTTAGAA TATAAAAATA TTAATGATAT AAAAAGAGTA
GATATTGTTA ATATTTTAAA GACCATAGAG CATAAAAGCG CTACGCTTCA AAAAGCAAAG
ATATGGATAA ATAAAGTATT TGAATATGCT TTGCAACTTG AGATCATAGA AAACAATCCC
GTAGCTTCTA TCAAAAACAA TATTGTATTT AAAAAACCAA ATCAGGTTAT ACACCAACCT
ACCCTATTAG ATGAATCTGA TATTAAAGAA TATATAAATA CTCTAATACA TTCAGATATC
AAACAAAGTC ATAAAAATTT AATGCTTTTT GTGCTTTTAA CAGCCCAAAG ACCTGGCAAT
GTTATAAAAG CTACTTGGGA TGAGATAGAC TTTAAAAATG AAATTTGGAC TATATCAGCT
CAAAAAATGA AAATGCGTAA AGAGCATAAT ATAGCATTAA GCAAACAAGC CATAAGTATA
TTAAAAAATC AATATGCGAT TAAAGTCAAT GATTATGTTT TTGCTGGTTC TTCTAAAAAA
GGATGTAATA GTGAAAATAT CACATGCAAT ACCAATAAAC GCTTAGGATA TAAAGGAATT
CAAAGCGCGC ATGGATTTCG TGCTATGTTT AGAAGCATTG CAAACGAAAA GCAATTGGAA
CATGGAGTAA GTATGGATAT AGCAGAGCAA TGCTTAGCTC ATGAGCAAAA AAATGCAATA
TTGAAAGCTT ACAATAGAAG TAAAAATATA GAATTAAAAA GAATATTAAT GCAGTGGTGG
GGAGATTATA TAGAAAAACT TGCAGGAAAG CTTAGCTAA
|
|---|
| Protein sequence | MAKINKLTDS FLKSVKCDNG KKFIKFSDPS IKGLYVFVYP SGRKLFKTRQ ANDTYITLGE
YPLLSLAELR EIAINSHKLK AKGQNISNAK RLKFGVLYDE VLENARKSNL AAKTIQRGLS
YKEGIFKSLE YKNINDIKRV DIVNILKTIE HKSATLQKAK IWINKVFEYA LQLEIIENNP
VASIKNNIVF KKPNQVIHQP TLLDESDIKE YINTLIHSDI KQSHKNLMLF VLLTAQRPGN
VIKATWDEID FKNEIWTISA QKMKMRKEHN IALSKQAISI LKNQYAIKVN DYVFAGSSKK
GCNSENITCN TNKRLGYKGI QSAHGFRAMF RSIANEKQLE HGVSMDIAEQ CLAHEQKNAI
LKAYNRSKNI ELKRILMQWW GDYIEKLAGK LS
|
|---|
| |