Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0818 |
Symbol | mdh |
ID | 7410398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 780062 |
End bp | 780958 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717948 |
Product | malate dehydrogenase |
Protein accession | YP_002575396 |
Protein GI | 222823822 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA CCATCATAGG CGCAGGAAAT GTTGGAGTAA GCACTGCTTA TGCTTTGATT TTAAGAGAGT TGGTTGATGA ACTTGTTTTA ATTGATATTA ATAAAGATTT ACTTTTTGCT AGAGAATTAG AATTAAGTCA GAGTATAGCT GCTTTTAATT TTGATATCAA AATAACTTGC ACAGATGATT ATGCACACTC AAAAGATTCC CAAGTAGTTA TTTTTAGTGC GGGAGTAGCT AGAAAAGAAG GTCAAAGCAG GGATGAGCTT TTTGCTATTA ATGCTAAAAT TATGCTTGAG TGTGCTAATA ATATTAAAAA ATTTAACAAC GATCCTTTAT TTATCATAGT AAGTAACCCT GTAGATTTTT TACTCAATGC TCTTTATGAA AGTAAATTAT TCTCATCAAA GAAAATCATT GCTATGGCAG GTGTTTTAGA TAATGCTAGA TTTAAATATG AAGTCGGTAA AAAATTAGAT ATAAAAACTT CTTATATAGA TACTAAGCTT ATAGGTTTTC ACAATGATAG CATGGTTTTG GTAAAATCTC AAAGTAAAGT TCAAAACAAA GCATTAAATA AAGTTTTAAA TGAATGTGAT CTTACTCAAA TAGAACAAGA AGTTAAAACA GGTGGTGCTA AAATCATAAA ATATTTAAAA ACTTCAGCCT ATTTAGCTCC TGCAAGTGCT TGTGTGAGGA TGATAGAAGC TTTAAAAAGT GGAGAATTTT TACCAATATG TGCGATTTTA GATGGAGAAT ATGGCATAAA AGAAAAAGCT TTTGGTGTTA TGGCAAGAAT TAGTCTTGAT GGAGTGCTTG AAATTTTGGA GTTAAAATTA GACAATCAAG AACAAATCGC ATTAGAAAAT TCTCTCTCTC AGTATAATTA TAAATAA
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Protein sequence | MKITIIGAGN VGVSTAYALI LRELVDELVL IDINKDLLFA RELELSQSIA AFNFDIKITC TDDYAHSKDS QVVIFSAGVA RKEGQSRDEL FAINAKIMLE CANNIKKFNN DPLFIIVSNP VDFLLNALYE SKLFSSKKII AMAGVLDNAR FKYEVGKKLD IKTSYIDTKL IGFHNDSMVL VKSQSKVQNK ALNKVLNECD LTQIEQEVKT GGAKIIKYLK TSAYLAPASA CVRMIEALKS GEFLPICAIL DGEYGIKEKA FGVMARISLD GVLEILELKL DNQEQIALEN SLSQYNYK
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