Gene Cla_0782 details

Gene Information

• Locus tag: Cla_0782
• Symbol: rep
• ID: 7410116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 743126
• End bp: 745153
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 643717912
• Product: ATP-dependent DNA helicase
• Protein accession: YP_002575360
• Protein GI: 222823786
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTAT CACGCTTAAA CGAAGAACAA TACAAAGCAG CTTGTGCTCC TTTTGGGCAC 
AATCTCATCA TAGCAAGTGC AGGCACAGGC AAAACTTCAA CCATAGTTGC AAGGATAGCC 
TTTTTACTTC AAAATGGCAC AAATCCTGAA AAAATCATGC TTTTAACCTT TACCAATAAA 
GCTAGCAAAG AAATGATAGA AAGACTTGGA AGATATTTTG ATAAAAATAT CACTTCAAAA 
ATCACAGCAG GGACTTTTCA CAGCACTGCC TATACGCTTT TAAAACAACT AAATCATGAG 
ATCATTTTAA AACAAGCAAG CGAGCTAAAG GTTCTTTTGC GATCTATTTT TGAAAAAAGA 
ACTTTTCATC ATTTAAGTGA TGTCAAACCT TACATGGCAA GTTATTTATA CGATGTGTAT 
TCTTTATTTC AAAATACAAA TTCAAATTTA GACAATTTTT ATGAATGGTT TTGTCAAAAT 
TACGATGAAC AAGCCGTATA TGCTGAAATT TATGAAGATA TCTTAAAAGA ATACGAAGAA 
GAAAAAGCGC GTTTTAATTA TGTGGATTTT AATGATTTGC TAATTAAACT AAAATATGCT 
TTAAAAGAAC ATCATTTTGA ATTTGATGAA ATTTTAGTAG ATGAGTATCA AGATACAAAT 
ACTTTGCAAG GCTCGTTAAT TGATGCATTT AAAAGCAAAA GTTTATTTTG CGTGGGCGAT 
TATGATCAAA GTATTTATGC TTTTAATGGA GCTGATATTT CCATTATAGG AAGTTTTAAA 
GATAGATTTT TGGATGCTAA AATTTTTACA CTCAATAAAA ACTATCGCTC AAGTAAAAAC 
ATACTTGCCT TGGCTAATAA AGTCATTTTA AATAATGAAA GATTATATCC TAAAGAATTA 
ATTGTTACCA GAGAAGGCGA TTTTAAAGCA CCAAGTTTGC TTACTTTTAA TGAATTATTT 
GATCAATATT CTACCATAGC TAAAATCATC TTACAAAGCG GGGTTGATTT AAATGAAATA 
GCGGTTATTT TTAGAAATAA CTCAAGCGCA GATGGCATAG AAGTAGCCTT AAGAGAACTT 
GGCATATCAA GCAAAAGAAA AGGTAGTGGA AGTTTTTTTG AAAGCTTGGA GGTAAAAGCA 
TTTTGCTCTA TGCTAGCGAT TATTTTAAAT CCAAAAGACA TCATGGCTTT TATACATTTA 
CTTGAATACA CAAAAGGCGT TGGCGGGGTT TTGGCTAAGG ATATTTTTGA TTCTCTTTTA 
AAGCTTGGCC ATGCTAATTT AATCAAAGGC TTTTTAGAAC CTGATACTAG CATAAATTTG 
AAAAAATACA AAAAACAAAG CTATCAACTT GGACTTTTTG ATGATATCGA AGAATTAGCC 
TCTCCTTTAA GGTTTAATTT AGAAAGTGAG TTTAATACCC ACCCTATTTT AAGTTTGCCT 
AAAATCAACG AAACTTGCGC AAAAAATTTA GAAAAATTGT GTTTATTTAT CAAAAAAGCA 
AGTGAGTGTA AAATTTCAAC CCAACTTGTA AATTTGATTT TAGAAAATGA TTATTTTAAA 
GAAATTTGTG ATATTTTAGC CACAAAAAGA GCAACCAATA AAAACTCCAA TGTTGATTTA 
AATAAAAAAA ATGAAATTTT AGAAAAAATC AGCGCAAAAA TGTTTGTCTT AAAAGAACTT 
GCAAAAAATT ATAGCGATAA TTACAAATAC TATAATTTTC TAACCCTTGG TGCAAGTGAA 
ATGAGTAATG GAAATGGAGT AAATCTTTTA AGCATACACG CTAGTAAGGG GCTTGAGTTT 
GAGCTTGTAT TTGTGATAGA TCTTGCACAG GGTAGATTTC CAAACCAAAA ACTCATGAGT 
ATGGGTGGTA GTTTAGAAGA AGAAAGAAGA TTATTTTATG TAGCAGTTAC TAGAGCTAAA 
GATACTTTAT ATCTAAGCTA TGCAAAATAT GATAAGATTA AAAAAAGTAA TTATCAACCA 
TCGTGTTTTC TAATCGAAGC AGGTATGTGT AAAGAAGAAC AAAAATAA 

 

Protein sequence

MPLSRLNEEQ YKAACAPFGH NLIIASAGTG KTSTIVARIA FLLQNGTNPE KIMLLTFTNK 
ASKEMIERLG RYFDKNITSK ITAGTFHSTA YTLLKQLNHE IILKQASELK VLLRSIFEKR 
TFHHLSDVKP YMASYLYDVY SLFQNTNSNL DNFYEWFCQN YDEQAVYAEI YEDILKEYEE 
EKARFNYVDF NDLLIKLKYA LKEHHFEFDE ILVDEYQDTN TLQGSLIDAF KSKSLFCVGD 
YDQSIYAFNG ADISIIGSFK DRFLDAKIFT LNKNYRSSKN ILALANKVIL NNERLYPKEL 
IVTREGDFKA PSLLTFNELF DQYSTIAKII LQSGVDLNEI AVIFRNNSSA DGIEVALREL 
GISSKRKGSG SFFESLEVKA FCSMLAIILN PKDIMAFIHL LEYTKGVGGV LAKDIFDSLL 
KLGHANLIKG FLEPDTSINL KKYKKQSYQL GLFDDIEELA SPLRFNLESE FNTHPILSLP 
KINETCAKNL EKLCLFIKKA SECKISTQLV NLILENDYFK EICDILATKR ATNKNSNVDL 
NKKNEILEKI SAKMFVLKEL AKNYSDNYKY YNFLTLGASE MSNGNGVNLL SIHASKGLEF 
ELVFVIDLAQ GRFPNQKLMS MGGSLEEERR LFYVAVTRAK DTLYLSYAKY DKIKKSNYQP 
SCFLIEAGMC KEEQK