Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0767 |
Symbol | hemC |
ID | 7410101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 729825 |
End bp | 730751 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717897 |
Product | porphobilinogen deaminase |
Protein accession | YP_002575345 |
Protein GI | 222823771 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTAA TCATCGCAAC AAGAAAAAGC CAACTTGCAT TATGGCAAAG TGAGTATATA AAAAACAAAT TATCCCAAAC ACATTCTGAT TTAGAAATTT CTTTAGAGGG TTTTAAAACC AAAGGCGATG TTTTACTTGA TTCACCTTTA GCTAAAATAG GCGGAAAAGG ACTTTTCACA AAAGAACTTG AAGAAAGTAT GCTAAGAGGT GATTCGCATT TAGCTGTACA TAGCTTAAAA GATGTACCTA GTTTTTTCCC AAAAGGTTTA GTTTTGGCTG CTATTTCAAA AAGAGAAGAA GTAAATGATG CTTTTTTAAG TGAGTATTAT GAGAGCTTAA ATGCCCTCCC AAAAGGTGCA AAAGTAGGTA CTACAAGCCT TAGAAGAAGA ATGCAACTTT TAGCACTAAG ACCTGATTTA AATATCATTT CTTTAAGAGG CAATATTAAC TCGCGCTTAG AAAAACTTAA AGCTAAAGAA TTTGATGCCA TTATTTTAGC ATTTGCAGGT ATTAAGCGTT TGGGTTTAGA AAAACAAATT AAATTTGTGA AAAAATTTGA ACTTGATGAA ATGATACCCG CAGCTTCCCA AGGAGCCTTA GGTATAGAAA GTATTGATGA TAAACAAATT TTAAAATACC TTGAATGCTT AAATGACAAA AATGCCTTTG TAGAAACCCA TATAGAAAGA GATTTTATAA AAACTCTAGA AGGTGGTTGC CAAGTACCTA TAGGTATTAA TGCAAAAATC ATTGATGAAA AAATAGAAAT TCGTGCCATA GTAGGCTTAC CTGATGCAAG TAAAATTCTC AAAGAAAAAA GAATGATTGA TAAGCAAGAT TACGCAAAAG CGGGCGAGCT TTTAGCTAAA GAAATGATAG CAAAAGGTGC AAAAGAAATT TTAAAAGAAG CAGAGAGTAT GATATAA
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Protein sequence | MQLIIATRKS QLALWQSEYI KNKLSQTHSD LEISLEGFKT KGDVLLDSPL AKIGGKGLFT KELEESMLRG DSHLAVHSLK DVPSFFPKGL VLAAISKREE VNDAFLSEYY ESLNALPKGA KVGTTSLRRR MQLLALRPDL NIISLRGNIN SRLEKLKAKE FDAIILAFAG IKRLGLEKQI KFVKKFELDE MIPAASQGAL GIESIDDKQI LKYLECLNDK NAFVETHIER DFIKTLEGGC QVPIGINAKI IDEKIEIRAI VGLPDASKIL KEKRMIDKQD YAKAGELLAK EMIAKGAKEI LKEAESMI
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