| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0766 |
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| Symbol | ubiD |
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| ID | 7410100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 728031 |
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| End bp | 729824 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643717896 |
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| Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_002575344 |
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| Protein GI | 222823770 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT TTGTAAATAT TTTAAAAGAA AATAATTTAT TAAAAATTAT TGATGAGCCA
GTTGATGTTG ATCTTGAAAT GGCACATCTT GCCTATATAG AAGTTAAAAA AGAAGACTCT
AAAGCTTTAC TTTTTACTAA TGCAGTTAAA GATGGTAGAA AGTATGATTA TCCTGTGCTT
TTAAATACAT TTTGCAATGA AAAAGCTTTA AATTTAGCTT TCACAAGATC TTATGAAGAT
GTAGCTAGTG AAATTACTTC TTTGCTAAAA ATGCACATAC CACAAAGCTT TGGAGCAAAA
TTAAATTTTT TCAAAACCTT ATTTGGCTTA AAAAATATCC CACCAAAGCG TATTAAAAAA
GATGGGGAAT TTAACTATAA AAGTTTAAAT TCATTATATG ATATGCCTAT TTTAAAAACT
TGGGAAAAAG ACGCTGCGCC TTTTATTACT ATGGGGCAAG TTTATACTCA AAGTATTGAT
GGTAAGCAAA ATAATCTTGG AATGTATCGT TTGCAAGTAG TTGATGAAAA AACCTTGCTT
ATGCATTGGC AAATTCACAA AGATGCGAGT CATTTTTTTC ATGAGTATAA AAAAGCAAAT
AAAAAAATGC CAGTAAGCAT AGCAATAGGC GGGGATCCTT TATATATTTG GTGTGCTCAA
GCACCTTTAC CTAAAGGAAT TTTTGAACTT TTACTTTATG GCTTTATCAA GAAAAAACCT
GCGATTTTGG CAAAATGCAA AAGCAATGAT CTTTTCGTGC CTTATGATAG TGATTTTGTA
ATTGAGGGTT TTGTAGATCC AAATGAATTT TTACCAGAAG GTCCTTTTGG TGATCATACA
GGTTTTTATA CCCCTATAGA ACCATGTCCG GTTTTAAAAA TAGAAAATAT TTTTGCTAAA
AAAAATGCTA TTTATCAAGC AACTGTTGTT GGAAAACCCC CATTAGAAGA TAAATATATG
GGACTTGGAA CAGAAAGAGT TTTTTTACCT TTACTTCAGA CAAATGCTCC TGATTTGATG
GATTACAACA TGCCTGAAAA TGGGGTTTTT CATAATCTCA TCTTAGCTAA AATAGAAGCA
AAATATCCAG CTCATGCAAA ACAAGTAATG CATACATTTT GGGGTGTAGG GCAAATGAGC
TTTGTAAAAC ATGCTATTTT TGTAGATGAA AACGCACCTT CATTAAAAGA CTATGACAAA
CTCATACCTT ATATACTCGA TCGTTTTGAT GAAGAAAAAT TACTCATTAG TGAAGGAATT
TGTGATCAAT TAGATCATGC TTCAAGTACT TATTGTTATG GTGGTAAAGC AGGACTTGAT
GCGTGTGGAG CTGAAAAAAA AGTTGAACTT GAAATTTTAA AAGATGAAAA TTTACTTCAA
TTTTTTAAAG AAAAAGATCA AAATATTTTA AATTTAAAAC AATTTTACAC TCAAACCTTT
GCTCCAATTT GTGTAATTTT AATAAACAAA AAAGAAAAAA TTTCTCAAGT TTTTGAAAAA
TTACAAATTT ATAAAAAGCA TTTTAGAATT TTAGTATTTT TAGATACTGA TGTTATCTTG
GAAAATCCTT ATATGTTAAT TTGGCGCGTG GTAAATAACA TCGATGCAAA AAGAGATATT
TTTATAAAAA AAGATTGTAT TGGTATTGAT GCGACAAATA AAGGAGCGCT TGAGAATTAT
CATAAAGAAT GGCCTTTAAT GACAAATTGT TCTAAAGAAG TTATAGATAG ACTTATTGCA
AAAAATTTAC TCAAAAATGA TGAAAAATTA TTCAAAAAGT TTGAAATTTT TTAA
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| Protein sequence | MQKFVNILKE NNLLKIIDEP VDVDLEMAHL AYIEVKKEDS KALLFTNAVK DGRKYDYPVL
LNTFCNEKAL NLAFTRSYED VASEITSLLK MHIPQSFGAK LNFFKTLFGL KNIPPKRIKK
DGEFNYKSLN SLYDMPILKT WEKDAAPFIT MGQVYTQSID GKQNNLGMYR LQVVDEKTLL
MHWQIHKDAS HFFHEYKKAN KKMPVSIAIG GDPLYIWCAQ APLPKGIFEL LLYGFIKKKP
AILAKCKSND LFVPYDSDFV IEGFVDPNEF LPEGPFGDHT GFYTPIEPCP VLKIENIFAK
KNAIYQATVV GKPPLEDKYM GLGTERVFLP LLQTNAPDLM DYNMPENGVF HNLILAKIEA
KYPAHAKQVM HTFWGVGQMS FVKHAIFVDE NAPSLKDYDK LIPYILDRFD EEKLLISEGI
CDQLDHASST YCYGGKAGLD ACGAEKKVEL EILKDENLLQ FFKEKDQNIL NLKQFYTQTF
APICVILINK KEKISQVFEK LQIYKKHFRI LVFLDTDVIL ENPYMLIWRV VNNIDAKRDI
FIKKDCIGID ATNKGALENY HKEWPLMTNC SKEVIDRLIA KNLLKNDEKL FKKFEIF
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