Gene Cla_0746 details

Gene Information

• Locus tag: Cla_0746
• Symbol: speA
• ID: 7410080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 711606
• End bp: 713435
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643717877
• Product: arginine decarboxylase
• Protein accession: YP_002575325
• Protein GI: 222823751
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.274472
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATT ATGGTATTAA TATTTGGGGT GCAAATAATT TTATCATCGA AAATGGCAAA 
GTATGTGTAA ATCATGGTAA AAAACCTGCC ATTATAGATA TAGTAAATAC TTTGCGTGAT 
GATGGCTATA AGGGGCCATT ATTGCTTCGT TTTCCTCATT TAATCCATAA GCAAATTGAG 
CAAATTTATG ATAAATTTGC TAAAGCAAAA AAAGAATTTA ACTATAAAGG TTCCTTTAAT 
GCTGTGTATC CATTAAAGGT TAATCAATAT CCAGGTTTTG TAAAAAATTT AGTTAATCTA 
GGTAGAGAAT ATAACTATGG CTTAGAGGCA GGAAGTAAGG CTGAGCTTTT ACTAGCTATG 
GCTTATAATA ATGAAGGTGC ACCTATAACG GTTAATGGTT TTAAAGATAA AGAACTCATA 
AATATGGGCT TTATAGCTTG TGAAATGGGA CATAATATCA CTTTGACTAT GGAGGGGCTT 
AACGAGCTTG AAGCGATGAT AGAAATTGCT AAAAATCGTT TCAAGCCAAA GCCAAATATA 
GGATTAAGAG TGCGTTTGCA CTCAGCTGGA GTTGGAATTT GGGCAAAAAG CGGTGGTATA 
AACTCAAAAT TTGGTTTAAC ATCCACTGAA CTTATTGAAG CAGTAAATCT TTTAAAAGCT 
AATAAACTTT TAGATCAATT TACTATGATA CATTTTCATC TTGGTTCGCA AATTACTGAA 
ATTCATCCTC TAAAAAAAGC TTTAAATGAA GCAGGAAACA TTTACACTGA ACTTAGAAAA 
ATGGGAGCAA AAAATTTAAA AGCCATTAAT CTTGGCGGGG GTTTAGCAGT AGAATACTCT 
CAGTTTAAAA ACGAAACAAG CAGAAATTAC ACCTTAAGTG AGTATGCAAA CGATGTGGTT 
TTTATATTAA AAAGCATTGC TGAGCAAAAA AAAGATCTTG AGCCTGATAT TTTTATAGAA 
AGTGGGCGTT TTGTAGCGGC TAATCATGCT GTTTTAGTAG CGCCTGTTTT AGAGCTTTTT 
TCTCAAGAAT ACACAGAAAG CAAGCTTTTA TTGAAAGACA AAAATCCTAA ATTAATTGAT 
GAGCTTTATG ATTTATACAA AAGCATAAAA GCTTCTAATG CATTGGAATA CTTACACGAT 
AGTATTGATC ATATGGAAAG CATTTTAACT TTATTTGATT TAGGATATGT GGATTTACAA 
GATAGATCAA ATAGTGAAAT TTTAGTGCAT TTAATCATGC GAAAGGCTAT TTCTTTGGTG 
GGTGATCAAG CTGATTTATC AAGCTTGCAA AATGAAGTGC AAGAAAAATA TTTGGTGAAT 
TTTTCTTTGT TTCAATCTTT ACCTGATTTT TGGGGTTTAG AGCAAAATTT TCCTATCATG 
CCTTTAGATA GACTCAATAA AAAACCAACT AGAAGTGCAA GTATATGGGA TATAACTTGT 
GATAGCGATG GAGAAATTTC TTATTCTAAA GATAATCCTT TGTTTTTACA TGATATTGAT 
GTAGAAGCTG AAGATTATTT TTTGGGATTT TTCTTAGTGG GTGCTTATCA AGAAGTTCTT 
GGTATGAAGC ATAATCTTTT CACTCATCCA AGCGAAGCTT GTATAAGTAT TAACGAAAAG 
GGTTTTGAAG TAGAAAGCGT GCTAGAGGCT CAATCCATTT TAGATACCTT AGAAGATCTT 
GACTATGATA TTCATGCGAT TATGGATAAT ATTAATGAAA AAATTTATGC TTCAAAACTT 
GTTAATGAAA ATCAAAAAAA GCATATTTTG GGTGAAATTT ATTTGTTTTT AAATGACAAT 
GGATATTTAA AAAGCATAGG TTCTAAATGA 

 

Protein sequence

MIDYGINIWG ANNFIIENGK VCVNHGKKPA IIDIVNTLRD DGYKGPLLLR FPHLIHKQIE 
QIYDKFAKAK KEFNYKGSFN AVYPLKVNQY PGFVKNLVNL GREYNYGLEA GSKAELLLAM 
AYNNEGAPIT VNGFKDKELI NMGFIACEMG HNITLTMEGL NELEAMIEIA KNRFKPKPNI 
GLRVRLHSAG VGIWAKSGGI NSKFGLTSTE LIEAVNLLKA NKLLDQFTMI HFHLGSQITE 
IHPLKKALNE AGNIYTELRK MGAKNLKAIN LGGGLAVEYS QFKNETSRNY TLSEYANDVV 
FILKSIAEQK KDLEPDIFIE SGRFVAANHA VLVAPVLELF SQEYTESKLL LKDKNPKLID 
ELYDLYKSIK ASNALEYLHD SIDHMESILT LFDLGYVDLQ DRSNSEILVH LIMRKAISLV 
GDQADLSSLQ NEVQEKYLVN FSLFQSLPDF WGLEQNFPIM PLDRLNKKPT RSASIWDITC 
DSDGEISYSK DNPLFLHDID VEAEDYFLGF FLVGAYQEVL GMKHNLFTHP SEACISINEK 
GFEVESVLEA QSILDTLEDL DYDIHAIMDN INEKIYASKL VNENQKKHIL GEIYLFLNDN 
GYLKSIGSK