Gene Cla_0742 details

Gene Information

• Locus tag: Cla_0742
• Symbol: ubiX
• ID: 7410076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 708751
• End bp: 709332
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 643717873
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_002575321
• Protein GI: 222823747
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 0.257517
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA TTTTAGTAGG TATTAGCGGA GCTAGTTCTT GCGAACTTGG TTTTTTGTTA 
TTAAAACATT TAAAAGAAAA AGGACAAATT TATGCTATTG TGAGTAAAAA TGCAAAAATA 
AGTTTTGCAA AAGAAAATTC TCTTTTAGAA AATATAGACT TTTTGCAACA CATAAAAGAT 
AAATTTGAGC TTGGACATGT AAATTTTTTA GATAATGAAG ATATTAGTCA ATGCGTTGCA 
AGTGGATCTT TTGGTATAGA AACGACTTTT ATCACACCTT GTTCTATTAA TACTTTAGCT 
AAGATATCTT GTGGAATTTG TGATAATCTT ATCACAAGAA GTGCAGCAGT GGCTTTAAAA 
GAAAGAAAAA AATTAATACT AGGTGTTAGA GAAATGCCAT ATTCTACTTT GAATTTAGAA 
CAAATGGCTA AACTTTCTAG CTATGGAGTT ATCATTGCTC CTCCTGTAAT AGCAAGTTAT 
GCTAAGATTG ATAATTTAGA AAAACTATAT GAATTTATCA TAGGAAAATG GCTTGATTTG 
GCAAATATTG AGCATAATTT ATACAAAAGA TGGGAAGGAT AA 

 

Protein sequence

MRKILVGISG ASSCELGFLL LKHLKEKGQI YAIVSKNAKI SFAKENSLLE NIDFLQHIKD 
KFELGHVNFL DNEDISQCVA SGSFGIETTF ITPCSINTLA KISCGICDNL ITRSAAVALK 
ERKKLILGVR EMPYSTLNLE QMAKLSSYGV IIAPPVIASY AKIDNLEKLY EFIIGKWLDL 
ANIEHNLYKR WEG