| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0726 |
|---|
| Symbol | peb2 |
|---|
| ID | 7410060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 696140 |
|---|
| End bp | 696883 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643717857 |
|---|
| Product | major antigenic peptide PEB2 |
|---|
| Protein accession | YP_002575306 |
|---|
| Protein GI | 222823732 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4588] Accessory colonization factor AcfC, contains ABC-type periplasmic domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.1322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTTTATTTTT AAGTTTATTT GCTGCAGCTG CATTGAATGC TGAAATTTTA
GTTTATGGCC CAGGTGGTCC AGCTCCTGTT TTAAAAGAAC TTGCTAAACA ATTTGAAGCA
AAAAGCGGAG AAAAAGTTAT TGTTAATGCA GGGCCAACAC CTAAATGGAT CAAACAAGCC
AAAATGGATG CTGATATTAT TTACTCTGGT AATACATCTA TGATGGATGG ATTTGTTAAA
GCTATGTCAA AACAAATCAA AATACAAGAT GTTCAGGTTT TAAATGCTAG AGGCTCAGGT
ATGATAGTAA GAGCTAATAA CCCTAAAAAA ATTAAAAAAT TTGAAGACCT TTTAAAAGAT
GGTGTTAATG TTATGGTGGT TGATGGAGCA GGACAGGTTG GCTTGTATGA AGATATGGCT
TTAAAAACAG GAAAAATCGA AAACCTAGAA AAACTTAGAA AAAACATCAA AGTGTATGCT
AAGAATTCAA AAGCTGCAGT TGATGAGTGG AAAAATAATC CAAATATCGA TGCTTTAATC
ATTTGGACAC ATTGGATTAA AGCAGTTGGT GAGAAAGAAA ATAAATTTAT TAAAGCAGAT
AAAAACTCAA TTATTTATAG AGCTGCTGAA ATAGTACCAA CACAAAAAGG TTTAAAAAAT
CCAAAAGTAG CTGAATTTAT AGAATTTACA CAAAGTAAAG AGGCACAAAA AGTATGGGAA
AAAGAAGGTT GGTTAGCTAA ATAA
|
|---|
| Protein sequence | MKKILFLSLF AAAALNAEIL VYGPGGPAPV LKELAKQFEA KSGEKVIVNA GPTPKWIKQA
KMDADIIYSG NTSMMDGFVK AMSKQIKIQD VQVLNARGSG MIVRANNPKK IKKFEDLLKD
GVNVMVVDGA GQVGLYEDMA LKTGKIENLE KLRKNIKVYA KNSKAAVDEW KNNPNIDALI
IWTHWIKAVG EKENKFIKAD KNSIIYRAAE IVPTQKGLKN PKVAEFIEFT QSKEAQKVWE
KEGWLAK
|
|---|
| |