| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0686 |
|---|
| Symbol | |
|---|
| ID | 7410020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 656356 |
|---|
| End bp | 657402 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643717817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002575266 |
|---|
| Protein GI | 222823692 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.725444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAC TAAGTAAAAA AGAAGCATTA AATTTGCTCC AAAATACACC TTTATATGAA
CTAGGTGCAA TGGCATATGA GAAAAAATTA GAGCTTCACC CTGAAAAAAT TACAACTTTC
GTGGTAGATA GAAATATAAA TTATACAAAT ATTTGTTGTA TTGATTGTGA TTTTTGTGCT
TTTTGCAGAA AAGAAAAAGA TGATGATTCT TATATTTTAA AATACGAAGA AATAGGGCAA
AAAATAGAAG AATTACAAGC CATTGGAGGC ACTCAAATTT TATTTCAAGG TGGGGTGCAC
CCAAAACTTA AAATACAATG GTATGAAGAC TTACTTTCTT ATATAAAAAC TAATTATCCT
GCTATTACTG TACATGGTTT TTCAGCAGTA GAGATAGCTT ATATAGCAAG AGTTTCTAAA
ATTTCTATAG AAGAGGTTTT AAAAAGATTA CAAGCTAAAG GACTTTTTTC TATACCTGGG
GCTGGTGCTG AAGTATTAAG CGATAGGGTA AGAGATATTA TAGCACCACA CAAATGCGAC
ACAGCTACTT GGCTAAAAGT ACATGAGAGT GCGCACAATA TAGGCATGAA AAGCACTGCT
ACTATGATGT TTGGCACGGT TGAAAATGAT GAAGAAATTA TCGAGCATTT TGATCATTTA
AGAAAATTAC AAGATAAAAC AAATGGCTTT AGAGCTTTTA TTTTGTGGTC ATTTCAAAGT
GAAAATACTC CTTTGATTAA AAAACATCCT GAAATTATCA AGCAAAGTTC TAATAGATAT
TTAAGATTGT TAGCTTTAGC AAGATTGTAT TTGGATAATT TTAAAAATTT ACAAAGCTCA
TGGGTGACCC AAGGTTCTTT AATAGGCCAG CTTGCTTTAA AATTTGGAGC TAATGATTTG
GGTTCGACTA TGATGGAAGA AAATGTAGTA GCAGCAGCTG GTGCAAAATA TAGAATGAAT
CAAGAGCAAA TGATAGAGCT TATTAAAGAT ATAGGAGAAT TACCTGCTAA GCGCGATACA
GCTTATAATA TCTTAGAGAG GTTTTGA
|
|---|
| Protein sequence | MDRLSKKEAL NLLQNTPLYE LGAMAYEKKL ELHPEKITTF VVDRNINYTN ICCIDCDFCA
FCRKEKDDDS YILKYEEIGQ KIEELQAIGG TQILFQGGVH PKLKIQWYED LLSYIKTNYP
AITVHGFSAV EIAYIARVSK ISIEEVLKRL QAKGLFSIPG AGAEVLSDRV RDIIAPHKCD
TATWLKVHES AHNIGMKSTA TMMFGTVEND EEIIEHFDHL RKLQDKTNGF RAFILWSFQS
ENTPLIKKHP EIIKQSSNRY LRLLALARLY LDNFKNLQSS WVTQGSLIGQ LALKFGANDL
GSTMMEENVV AAAGAKYRMN QEQMIELIKD IGELPAKRDT AYNILERF
|
|---|
| |