Gene Cla_0604 details

Gene Information

• Locus tag: Cla_0604
• Symbol: ribB
• ID: 7410670
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 576356
• End bp: 577378
• Gene Length: 1023 bp
• Protein Length: 340 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 643717735
• Product: bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein
• Protein accession: YP_002575187
• Protein GI: 222823613
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGATATG TTAGTGTAGA ACAAGCCATA AAAGAACTTC AAGATGGCAA GATGTTGATA 
ATGGTAGATG CAGAAGATAG AGAAAATGAA GGGGATTTGA TTTTCCCTGC GCAATTTAGC 
TCAAAAGAGA AAGTAAATTT TACCATCACT CATGCAAGAG GCGTGGTGTG TGTAGCATTA 
AGTGAAAATT TAGCTAAAAA ATTTGAACTA CCTTTAATGG TACCTAAAAA TACTTCTAAT 
CACGAAACAG CTTTTACTAT AACCGTTGAT GCTAAAAATG CAACAACTGG AGTAAGTGCT 
TATGAAAGGG ATATGACTAT ACAAATTTTT GCTGATGATA ATGCAAAAGC AAGTGATTTT 
GTGCGCCCTG GCCATATCAA TCCTTTAATA GCAAAAAAAG GTGGGGTTTT AGAAAGAACA 
GGACACACAG AAGGAACGGT GGATTTATGT CGTTTAGCAG GATTAAAAGA AGCTTGTGTA 
ATATGTGAAA TTGTTAAAGA TAATGGAGAT ATGGCTAGAA GAGATGATTT ACTTGAGTTT 
TGCAAAAAAC ATGATATTAA CATGATTACT ATTTCAGATT TAATCGAGTA TCGTTTAAAA 
AATGAAAGTT TGATTTCTTT AATCAAAGAA GAGGATAGTA TTTTAGCAGG TTTTAAAGCT 
AAAAAGATGA TTTTTAAAGA TCATAATGCA AATGAACATA TAGCTTTTAG TTTTGGTGCT 
TTAAAAGAAT GTGAGAATGT TAAATTTTAT CTTAGCGGAA GTGATTTTGA GCTTTTAACT 
TCTAATAAAT TTAATGAATT ATTAAAACAA ATTGAATTTT TAAGCCAAAA AGGTGGTGTA 
ATCATTTTCA TGAAAAATGA AAAACAAGAA AATACTCAAT TTAAAAATTA CGGCATAGGA 
GCGCAAATTT TAAGATATTT AAAAATTTCA AAAATCAAAC TTCTAAGTCA AAATACCGAT 
AAAGAATTTA TAGGCTTAAA AGGTTTTGGG CTTGATATTA CAAGCAGTGA TTTTAAAGCT 
TAA 

 

Protein sequence

MGYVSVEQAI KELQDGKMLI MVDAEDRENE GDLIFPAQFS SKEKVNFTIT HARGVVCVAL 
SENLAKKFEL PLMVPKNTSN HETAFTITVD AKNATTGVSA YERDMTIQIF ADDNAKASDF 
VRPGHINPLI AKKGGVLERT GHTEGTVDLC RLAGLKEACV ICEIVKDNGD MARRDDLLEF 
CKKHDINMIT ISDLIEYRLK NESLISLIKE EDSILAGFKA KKMIFKDHNA NEHIAFSFGA 
LKECENVKFY LSGSDFELLT SNKFNELLKQ IEFLSQKGGV IIFMKNEKQE NTQFKNYGIG 
AQILRYLKIS KIKLLSQNTD KEFIGLKGFG LDITSSDFKA