Gene Cla_0601 details

Gene Information

• Locus tag: Cla_0601
• Symbol: glyS
• ID: 7410667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 572616
• End bp: 574610
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 643717732
• Product: glycyl-tRNA synthetase subunit beta
• Protein accession: YP_002575184
• Protein GI: 222823610
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0751] Glycyl-tRNA synthetase, beta subunit
• TIGRFAM ID: [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAT TAATAGAAGT AGGCACAGAA GAACTTCCTG CTATTCCTTT ATTGAAAGAA 
CTTCCAAATA TTAGTCAAAA ATGGGAAAAA ATTTTACAAG AGTATCATTT AGAAGCTGAA 
TTTAAATTTT TTTATACGCC TAGAAGATTA GTTTTTATCC ATGAAAATTT TAAAGAAAAA 
CAAGATGATT CTTTTGTGGA ATTTATAGGA GCTCCTAAAA CTATAGCTTA TAAAGATGGA 
AAGCTTACTC AAGCAGGACT TAGCTTTTTA GAAAAAAGTG GTTTGAAAGA AGAAGAGCTT 
GAATTTAAAG AAATTAAGGG TAAAGAAGTA TTGTATTGTC AAAAACAAGT GCAAGGTTTA 
CAAAGCAAAG AAGTTTTAGC AAAAATGATT GAAACTTTTT TAAAAAGCTT GAGTTTTGGT 
AAAACTATGA GATGGGGCGA TGGTAGCTTT GAATTTATCA GAGCTATTCG CTCGCTTTGT 
TGTATTTTAA ATGATGAATT AGTTGAGTTT GAAAGCTATG GTGTTAAAAG TGCAAAAAGT 
ACTTTTGTAC ATAGAAGTGT TAGTTATGAT TTAATATCTT TTAAAAATAT TGATGAGTAT 
TTTAAAATCT TAGAGAAAAA TTATGTAATT TTAGATCAAG AACAAAGAAA AAAACTTATC 
ATTGAGCAAT TAAAAACACT TGAAAAAGAA AATGATATTA TGATTTCAGA AGATGATGAG 
CTTTTGGCTG AAGTTGTGGC TATCACAGAG TATCCAAAAG CATTATTGGG ACATTTTGAA 
AAAGAGTATT TAGAAATCCC AAGTGAAGTA ATCATTACTT CTATGAGAGA AAACCAGCGT 
TATTTTGCAG TATTTAAAAA TAATACTTTG AGTAATCATT TTGTGGTTGT GTCTAATGCA 
GTTTGTAAAG ATTATTCTAA AATCATTAAT GGCAATGAAA GGGTTTTAAG AGCAAGATTA 
AGTGATGCGA TGTTTTTTTG GAAAAATGAC TTAGCACAAG GTTTAAATAA TGACAAAATA 
AGTCAAATGG TCTATCTTGA AGGACTTGGA ACCTTAAAAG ATAAAATCAT CAGAGAACAA 
AAAGTTGCTA CTAAGCTTTG TGAAATTTTT GCTAATACTC AAAAGAATGA AATTTTAAAA 
GCCATAGAAT ACTCAAAAGC CGATCTAAGT ACTCAAATGG TGTATGAATT TACTGATCTT 
CAAGGTATTA TGGGTTCTTA TTATGCTAAG GCTATGGGTA TGAGTGATGA AATTGCATTA 
GCTATTAAAG AACAATATCT TCCAAATGGT GATAATTCAG CTATGCCAAG TAATGAATTT 
AGCTCTATTG TAGCTTTAGC TAATAAACTT GATACTCTCA TGGGACTTTT TTCTATAGGA 
AAGATTCCAA GTGGTACAAA AGATCCATAT GCGCTAAGAA GAGCAGCAAA TGGTGTTTTA 
AAAATTATCC TAGCTTTAAA TAAAAACTTT GATTTAAAAG TATTTTTAGA AGCAATAGCT 
AGTGAGTATA AAAGCTTTGA TTTAAAAATT TTATTAGATT TTATCTTAGA GCGTTTATAT 
ACTTTTTATA ATGCAAATCC TTCTTTTATC AAAGCAGTAC TTAGTTCAAA AAATTATGAT 
ATTGTTTATA TTGATTCTTG TATTAAAGCT TTGATTCAAA GTGCAAATAA GGCAGATTTT 
AGTCAAAATT TTGCTACCTT TAAGCGTTTG GCAAATATTG TAGTATTAAG TGAAGCTCAA 
ATTAATGAGA ATTTATTTAA CACTCAAGAG GAAAAAGATT TATACCAAGC TTTTATGCAG 
TGTAAAGCAA AAGAAAATAA TACCCAAGAG CTTTTAGAAA GCCTTTTTGC GCTCAAACCT 
CAAATTGATG CTTTTTTTGA TAAAGTAATG ATTAATGACA AAGATGAAAA TATAAAAAAC 
AATCGTCAAG CTTTAGTATG CGCGATTTAC CACGAGTTTT TAAAAATAGC TGATATTAAA 
GAACTTAGCT TATGA 

 

Protein sequence

MKLLIEVGTE ELPAIPLLKE LPNISQKWEK ILQEYHLEAE FKFFYTPRRL VFIHENFKEK 
QDDSFVEFIG APKTIAYKDG KLTQAGLSFL EKSGLKEEEL EFKEIKGKEV LYCQKQVQGL 
QSKEVLAKMI ETFLKSLSFG KTMRWGDGSF EFIRAIRSLC CILNDELVEF ESYGVKSAKS 
TFVHRSVSYD LISFKNIDEY FKILEKNYVI LDQEQRKKLI IEQLKTLEKE NDIMISEDDE 
LLAEVVAITE YPKALLGHFE KEYLEIPSEV IITSMRENQR YFAVFKNNTL SNHFVVVSNA 
VCKDYSKIIN GNERVLRARL SDAMFFWKND LAQGLNNDKI SQMVYLEGLG TLKDKIIREQ 
KVATKLCEIF ANTQKNEILK AIEYSKADLS TQMVYEFTDL QGIMGSYYAK AMGMSDEIAL 
AIKEQYLPNG DNSAMPSNEF SSIVALANKL DTLMGLFSIG KIPSGTKDPY ALRRAANGVL 
KIILALNKNF DLKVFLEAIA SEYKSFDLKI LLDFILERLY TFYNANPSFI KAVLSSKNYD 
IVYIDSCIKA LIQSANKADF SQNFATFKRL ANIVVLSEAQ INENLFNTQE EKDLYQAFMQ 
CKAKENNTQE LLESLFALKP QIDAFFDKVM INDKDENIKN NRQALVCAIY HEFLKIADIK 
ELSL