Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0592 |
Symbol | cjaC |
ID | 7410658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 564754 |
End bp | 565512 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717723 |
Product | amino acid ABC transporter, permease/substrate-binding lipoprotein |
Protein accession | YP_002575176 |
Protein GI | 222823602 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000000143889 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATTATATGT TGTTTTAGCG TTATTTGGTA TGTTGGTTTT AGGTGCTTGC TCAAGCGATA AAAATCAAGC TAGTGCTTCT AGTGAAAAAG TTTATAAAGT AGGTATAGCT GCAAATTATC CTCCTTTTGA TTTTGTTAAA GATGCAAAAA TTACCGGATT TGATGTTGAT TTGCTAGAAG AGATTGCAAA AAGAGAAAAT TTAAAACTTG AGTGGGTAAA CATGAGTTTT GATGGTTTGA TCCCTGCTTT AAAAGCTGGA AAGATTGATA TGATAGCTTC TGCTATGAGT TCAACACCAC AAAGACTCAC TAGTATGGAT TTTAGTGATA CTTATTTTAA TACTAAAAAT TTATATTTAA AACTAAAAAC AGATTCTAGT ATTAGCGATA AAAAAAGTTT GGAAGGTAAA AAAATAGGTG TTCAGCTTGG AACCATCCAA GAAAGTGCCG CTAAGACTAT TCCAAATACT CAAGTTGTAG CTAGTGAAGA AATGTTAGCT GCAATTTTGG CTTTAAAAGC TGGTAAAGTT GATGCGGTTT TAACAGATAA GGATATCGGT AAAGGTTATT TAAAAACTAA TGAAGAGCTA GAAGCATTTT TAGAAGAAAA TGATGGAAGT TCAGGATTTT GTATAGCTTT TGATAAAGGA AAACAAACTG AGCTTGTTCA AAAAATTAAT GCAGGTTTAG AAAAAGTTAA AGCCGATGGT ACTTACCAAA AAATCGTAGA AAAATACGAT TTACAATAA
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Protein sequence | MKKILYVVLA LFGMLVLGAC SSDKNQASAS SEKVYKVGIA ANYPPFDFVK DAKITGFDVD LLEEIAKREN LKLEWVNMSF DGLIPALKAG KIDMIASAMS STPQRLTSMD FSDTYFNTKN LYLKLKTDSS ISDKKSLEGK KIGVQLGTIQ ESAAKTIPNT QVVASEEMLA AILALKAGKV DAVLTDKDIG KGYLKTNEEL EAFLEENDGS SGFCIAFDKG KQTELVQKIN AGLEKVKADG TYQKIVEKYD LQ
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