Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0571 |
Symbol | |
ID | 7411131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 545049 |
End bp | 546986 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717702 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_002575156 |
Protein GI | 222823582 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.940937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCTTTAA TAGATTTAAT CGATGCAAAT AAGAAATTTA ATACAAAAAT AATCTTAGAA AATGCAAATT TTAGTGCAAA TTTAGGAGAA AAAATCGCCA TCATAGGTAA AAATGGCGAA GGAAAATCAA GCTTTCTAAA AGCCCTTATG GGAACTTTAA AACTAGATAG CGGTAGAGTG ATTAAACAAA ATAATGCTAG CATAGGCATG CTAAGCCAAC AAGTAAGTTT TCAAAGTTCA TTAAGTGTAA ATGAAGCCAT AAAACAAGAA CTTGAAGAAA TTTATCAAGC CTTAAAAGAA TTTGAAAACT ATAATGAAAA ACTAGCAATA AATCCAGAAA ATAAAGAATA TTTAAAAAAA GTAGATGAAT TAAGTTTATT TATAGACTCA AAAGATGCTT GGAATTTAGA TCAAAAAATT CAAAGGGTGC TAGAAGAATT TAAACTATTA GAATATAAAG ATAGGGTGCT TTGTTCTTTA AGCGGGGGTG AGATTAGACG CGTAGGACTT TGTACTTTGC TTTTAAAAAA TCCTGACATC TTGCTTTTAG ATGAGCCAAC TAATCATTTA GATGTATATA TGAGTAGCTT CTTGGAAGAA AGATTAAAAG CTTCTAAAAT GTGTGTTATT TTCATCTCTC ATGATAGATA TTTCATAGAT GCAATAGCGC AAAAATGTGT GGAAATAGAA GCAGGAAAAT TAAGTGTTTT TGAGGGTGGA TACACGCAGT ATTTAGAAAA AAAAGCAGCC ATTTTAGCAT CTTTAGCAAA AAGTCATGAA GCCTTACTTA AGCAATTAAA AAGCGAAGAA GAATGGCTAA GAAGAGGAGT TAAAGCTAGA CTTAAACGCA ACGAAGGGCG TAAAGAGCGA ATTTTTAAAA TGCGCGAAGA AGCCAAAAAA AATCCTTCTG CGATAAAACG CTTAGAGCTT GAAATAAAAA GAGCGAGTAA AAATTTCAAC CAAAACCAAA GTCAAAACCG CAAAAAAATG CTTTTTGAAC TTAAAAATAT CTCAAAGTCT ATTGCCAACA AGACACTTTT TAAAGATTTT AATGCACGAA TTTTACAAGG TGAGCGCATA GCTATAGTAG GAAAAAATGG CTGTGGGAAA TCTACCTTTT TAAAAATTTT ACTTGATCAA ATTCCACTTG ATAGCGGAGA GATTAAAAGG GGCAAAGTAA AAATTGGCTA TTTTGATCAA AGTAGGAGCT TGCTAAATAC TGATAAAAAA CTTTTAGAAA TTTTTTGCCC AAATGGCGGT GATCATATCC AAGTGCGTGG TAAAAATATG CATGTTTATG GGTATTTAAA ACAATTTTTA TTTCCAAAAG AATTTTTAGA GCAAAGCGTG AGTGTGCTAA GTGGGGGTGA GAAAAATAGA GTCGCCCTAG CCTTGCTTTT TACCAAAGAA TATGATGTAT TAATCTTAGA TGAGCCAACA AATGATTTAG ACATTGCTAC GATTAATATT TTAGAAGAAT ATTTACTTTC CTTTGAAGGT GCGATTTTGC TTGTATCACA TGATAGATAT TTTGTCGATA AAATAGCAAC CAAGCTTTAT GCTTTTGAAG ATAATGCAAA TATCAATATA GAAGTTCTTT CTTATAGTGA GTATTTAGAA AATGAAAAAG AAATGAATGA TTTTAAAGAT TTTTCTAAAA GTTTGCTTCA AAATGAAAGC CAAACACAAA AATTTAAAGA AAAAAATACT AAAAAATTAA GCTATAAAGA AAATGAAATT TTATTAAAAC ATCCAGAAAA AATAAGTATT TTAGAAAAAG AAATCAACAT CTTAAAACAT TCTTTAAGTG ATCCTAAAAT TTATCAAGAG CAAGGTATAA ATACTTTATA TGAAAGATTA AATGAGTTAG AAAATAACCT TGAGATTTTA GAAAATGAAT ATTTTGAAGT TTTAGAAAAA AGCGAAAATT TAGATTGA
|
Protein sequence | MALIDLIDAN KKFNTKIILE NANFSANLGE KIAIIGKNGE GKSSFLKALM GTLKLDSGRV IKQNNASIGM LSQQVSFQSS LSVNEAIKQE LEEIYQALKE FENYNEKLAI NPENKEYLKK VDELSLFIDS KDAWNLDQKI QRVLEEFKLL EYKDRVLCSL SGGEIRRVGL CTLLLKNPDI LLLDEPTNHL DVYMSSFLEE RLKASKMCVI FISHDRYFID AIAQKCVEIE AGKLSVFEGG YTQYLEKKAA ILASLAKSHE ALLKQLKSEE EWLRRGVKAR LKRNEGRKER IFKMREEAKK NPSAIKRLEL EIKRASKNFN QNQSQNRKKM LFELKNISKS IANKTLFKDF NARILQGERI AIVGKNGCGK STFLKILLDQ IPLDSGEIKR GKVKIGYFDQ SRSLLNTDKK LLEIFCPNGG DHIQVRGKNM HVYGYLKQFL FPKEFLEQSV SVLSGGEKNR VALALLFTKE YDVLILDEPT NDLDIATINI LEEYLLSFEG AILLVSHDRY FVDKIATKLY AFEDNANINI EVLSYSEYLE NEKEMNDFKD FSKSLLQNES QTQKFKEKNT KKLSYKENEI LLKHPEKISI LEKEINILKH SLSDPKIYQE QGINTLYERL NELENNLEIL ENEYFEVLEK SENLD
|
| |